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Trisurf Monte Carlo simulator

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2014-03-18

Adding ending energy to filaments. In progress. Continue in single_filament...

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2014-03-14

Added filaments inside the vesicle. TODO: tape etc.

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2014-03-11

Fixed counting of iterations when invoked with --reset-iteration-count

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2014-03-11

Fixed bugs when dump file is missing. Prepared flags for setting filenames

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2014-03-10

Just some comments and tape parsing.

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2014-03-10

added assigning new values to restore from dump

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2014-03-10

not using global force_from_tape

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2014-03-08

small fix in reset-iteration-count

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2014-03-08

Merge branch 'trisurf-polyel'

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2014-03-08

Parsing command line arguments is still kind-of messy, but it workds for fo...

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2014-03-08

continuation s working. now reset counter is needed

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2014-03-08

tape fixed, output has additional timestamp, ncurrent iteration is dumped a...

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2014-03-08

Merged with dump-state. Added some arg switches that need to be inished

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2014-03-08

Merged branches polyel with constant volume

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2014-03-08

debugged seg_fault. Found error in io.h. However, it is u...

polyel-constVol

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2014-03-08

It seems that bondlip is debugged. Still, recommend testing

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2014-03-08

backuping vtxes complete. debugging bondflip

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2014-03-07

finished constant volume. Problems still exists.

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2014-03-07

Changed bondflip. lm, lp found before and only once

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2014-03-07

Many fixes, before changing bondflip. triangles are still calculated in ts_...

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2014-03-06

Started with arg parsing

dump-state

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2014-03-06

Merge branch 'trisurf-polyel'. It is the most debugged version. True, witho...

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2014-03-06

Dump and restore complete and debugged. Still, use with caution

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2014-03-06

Fixed a bug in vertex reinit. Still buggy.

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2014-03-06

Fixed a bug. added cells

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2014-03-06

Dump state seems to work

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2014-03-05

Merge branch 'master' of bitbucket.org:samop/trisurf-ng

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2014-03-05

First step in dump and restore. Grafted vtx still missing in the process

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2014-02-27

Bug found and removed: polys now also translated when origin moves to the c...

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2014-02-21

Removed harmonic potential between poly-monomers for now. Added min and max...

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2014-02-21

Nothing special.

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2014-02-12

Just added some fprint info during run.

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2014-02-12

Bug if(cell_occupation>1) in cell.c found and removed! Hura!!!!

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2014-02-11

Merge branch 'master' of bitbucket.org:samop/trisurf-ng

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2014-02-11

Revert "Revert "Testing program speed...""

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2014-02-11

Revert "Testing program speed..."

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2014-02-06

Polymers thermicaly move now! HArmonic potential added.

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2014-02-06

Adding polymers MC steps (not done yet)...

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2013-12-07

Finished io.c. Changes made also in poly.c to accomodate unique indexing of...

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2013-12-07

Added poly information to tape& parsing function. Also, poly_list is freed ...

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2013-12-03

Samo&Miha poly_list_free added.

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2013-12-03

Samo&Miha: Poly structure build and debugging.

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2013-11-29

Structures for grafted polymers (Samo&Miha)

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2013-11-29

First test of new branch. Nothing done yet.

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2013-11-27

Returning back to 142a67fe82b830e5c7816914afa62445959c87ca

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2013-11-05

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2013-11-05

Testing code without bondflip

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2013-11-05

Vertex tainting done

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2013-11-05

changes in bondflip call. No need to bondflip all the bonds, but only as ma...

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2013-11-04

Changes in main loop. It allows setting inner, outer loop and initial mc sw...

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