Trisurf Monte Carlo simulator
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Samo Penic
2014-06-13 5b9ee8bd462b8be998c011f2d0be594fc6f7bf06
2014-06-13 Samo Penic
Cahnged capping on the end of the line
tree@ 5b9ee8 commitdiff
2014-06-13 Samo Penic
Fix: the 2d contour of cross-section is calculated only if shperical harmon...
tree@ 8a72f3 commitdiff
2014-06-13 Samo Penic
Now it works after remake! However, some crossection segments are in the li...
tree@ ad4e70 commitdiff
2014-06-13 Samo Penic
It works, png is output. The only problem is that some triangles are missing
tree@ a61c00 commitdiff
2014-06-13 Samo Penic
seems to work.
tree@ d27c07 commitdiff
2014-06-13 Samo Penic
First attempt to calculate points of cross-section
tree@ 0af0cf commitdiff
2014-06-06 Samo Penic
CV bug fix. Changes in constant volume: verifying the neightbour distances ...
tree@ 41637a commitdiff
2014-06-03 mihaf
Added random seed.
tree@ c60a49 commitdiff
2014-05-27 mihaf
Added output of ulm2 for each outer loop. (second time)
tree@ 5a3862 commitdiff
2014-05-13 mihaf
Just tape
tree@ 0f9d22 commitdiff
2014-05-06 Samo Penic
changes saved
tree@ 7d5e22 commitdiff
2014-04-30 Samo Penic
Constant volume works. CAVEAT: in centermass I had to recalculate all norma...
tree@ 3de289 commitdiff
2014-04-30 Samo Penic
Debugged so it does not segfaults. It seems it keeps volume constant in one...
tree@ dd5aca commitdiff
2014-04-30 Samo Penic
Debugged vertexmove. testing bondflip.
tree@ fe5069 commitdiff
2014-04-29 Samo Penic
Bondflip doesnt segfaults anymore. Bondflip is disabled, debugging vertexmove
tree@ b2fa8c commitdiff
2014-04-29 Samo Penic
Constant volume in bondflip need lots of debugging
tree@ fbcbdf commitdiff
2014-04-28 Samo Penic
Added most important missing files
tree@ 460c2a commitdiff
2014-04-28 Samo Penic
Only reaction on successful acceptance of MC step needs to be programmed.
tree@ 958e0e commitdiff
2014-04-28 Samo Penic
Almost over.
tree@ 43c042 commitdiff
2014-04-28 Samo Penic
Before adding constant volume subrutines
tree@ 2b14da commitdiff
2014-04-28 Samo Penic
Did major change in vesicle datastructure. Added tape information into vesi...
tree@ 9166cb commitdiff
2014-04-28 Samo Penic
Merge branch 'trout-rbc'
tree@ b36841 commitdiff
2014-04-25 Samo Penic
Added extra calculation of Kc from 3<=l<=6
tree@ 1665aa commitdiff
2014-04-24 Samo Penic
added 3 different calculations for Kc
tree@ 22cdfd commitdiff
2014-04-24 Samo Penic
Kc calculation seems to work. Performance issues persists.
tree@ 9f2ad6 commitdiff
2014-04-23 Samo Penic
in debuggingg ptrocedure
tree@ 0ee39c commitdiff
2014-04-23 Samo Penic
Calculating Kc. Needs debugging.
tree@ f06f5f commitdiff
2014-04-21 Samo Penic
Added complex spherical harmonics.
tree@ 459ff9 commitdiff
2014-04-17 Samo Penic
Changed atan to atan2 for transfroming coordinates from cartesian to spheri...
tree@ e9c87e commitdiff
2014-04-16 mihaf
Output for spherical harmonics testing added.
tree@ 5bb6bb commitdiff
2014-04-11 mihaf
Merge branch 'trout-rbc' of https://bitbucket.org/samop/trisurf-ng into tro...
tree@ 091f7d commitdiff
2014-04-11 mihaf
Nekaj malega. Ne veva več kaj.
tree@ 611412 commitdiff
2014-04-10 Samo Penic
Added possibility to skip calculations of spherical harmonics. Fixed docume...
tree@ 632960 commitdiff
2014-04-09 Samo Penic
Added spherical harmonics as-is into rbc
tree@ dc77e8 commitdiff
2014-04-07 Samo Penic
added statistics output to the outer loop
tree@ 37d14a commitdiff
2014-04-06 Samo Penic
Gyration tensor calculations
tree@ 01d871 commitdiff
2014-04-02 mihaf
In cell.c changed comparison between vertices in a cell from idx to pointer...
tree@ 555fd8 commitdiff
2014-03-26 mihaf
pswitch can be changed on the fly.
tree@ bc9583 commitdiff
2014-03-25 mihaf
Added nucleus. Better initial configuration of filaments.
tree@ fe24d2 commitdiff
2014-03-24 mihaf
Added dmin_interspecies.
tree@ ea1cce commitdiff
2014-03-24 Samo Penic
Fix.
tree@ 144784 commitdiff
2014-03-21 Samo Penic
Merge branch 'trisurf-polyel'
tree@ ff8152 commitdiff
2014-03-21 Samo Penic
Merge with trout-rnc.
tree@ 42641c commitdiff
2014-03-21 mihaf
Little add.
tree@ 402e8f commitdiff
2014-03-21 mihaf
Filament inside the vesicle added and debugged. Testing time...
tree@ bcf455 commitdiff
2014-03-19 mihaf
continuing...
tree@ b30f45 commitdiff
2014-03-18 mihaf
Adding ending energy to filaments. In progress. Continue in single_filament...
tree@ 58230a commitdiff
2014-03-14 mihaf
Added filaments inside the vesicle. TODO: tape etc.
tree@ 624f81 commitdiff
2014-03-11 Samo Penic
Fixed counting of iterations when invoked with --reset-iteration-count
tree@ aab4ad commitdiff
2014-03-11 Samo Penic
Fixed bugs when dump file is missing. Prepared flags for setting filenames
tree@ 3f5c83 commitdiff
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