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Trisurf Monte Carlo simulator

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2016-07-07

Begin adding the preview functionality in python2.7, not completed yet.

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2016-07-06

vtk visualization

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2016-07-06

Fixes in python to allow Python 2.7 execution

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2016-07-06

Missing files for remote connection

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2016-07-06

Finished spontaneous force

nirgov

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2016-07-05

Some minor changes

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2016-07-05

Histogram data written to file

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2016-07-05

Fixed some bugs in cluster.c, added a line in cluster.h

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2016-07-05

Merge branch 'nirgov' of bitbucket.org:samop/trisurf-ng into nirgov

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2016-07-05

Added stub function for clustering

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2016-07-05

Merge branch 'clustercount' into nirgov

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2016-07-04

Small addition, not sure if it is necessary

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2016-07-04

Small addition, not sure if it is necessary

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2016-07-04

cluster.c rewritten from memory

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2016-07-04

Forgot to commit cluster.c, now it is loast and I am rewritting. Step 1: cr...

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2016-07-03

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2016-07-03

Tried to made all functionality for clustering. Not debugged and will proba...

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2016-07-03

Prepared skeleton for cluster counting routines

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2016-07-03

Merge branch 'paraview'. This enables view of triangles in paraview.

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2016-07-03

fixed some of the issues while reconstructing wesicles. Added Nbw/Nb metric...

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2016-07-03

Stated to write tspoststat.c

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2016-07-03

Difference in energy still persists.

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2016-07-03

restoring vertices with spontaneous curvatures seems to work, however, the ...

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2016-06-22

Merge with paraview's branch. Added triangles as cells for visualization

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2016-06-21

Removed accidentaly added spontaneous curvature settings.

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2016-06-21

Removed accidentaly added spontaneous curvature settings.

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2016-06-21

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2016-06-21

Testing and fixes

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2016-06-21

Fix in number of spontaneous curvature vertices calculation

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2016-06-21

Change in location of setting spontaneous curvature. Now it is done in init...

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2016-06-14

Updated trisurfmanager file. Added remote computer capabilities. Added web ...

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2016-06-14

Fixed restarting when inititer is not 0

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2016-06-07

Fixed energy calculations

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2016-06-07

Added spontaneous curv.

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2016-06-02

Another fix in previous questionable commit

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2016-06-02

questionable commit -- the ETA is calculated using only last two entries in...

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2016-06-02

Modification in statistics.py -- filename can be specified to be ulm2.csv, ...

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2016-06-02

ConstVol and ConstArea area+volume are now also in the snapshost. Fix in ti...

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2016-06-02

Changed define in initial_distribution.h from A0 to DEF_A0 to avoid possibl...

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2016-06-01

combined statistics output to file

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2016-06-01

Replacing statistics...

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2016-06-01

Added statistics combining python script. Rudimentary at the moment.

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2016-06-01

Statistics.csv and ulm2.dat are being appended if simulations are restarting

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2016-05-31

Fix in vertexmove. Macro was not working

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2016-05-31

Use nucleus displaced centre in vertex move

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2016-05-31

Nucleus translates with the vesicle. Dump and restore includes optional <nu...

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2016-05-28

removing extra print.

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2016-05-28

A small fix. If a continuation of simulation with a starting snapshot is re...

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2016-05-27

Added examples to help

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2016-05-27

Added some basic help on flags. Unformatted.

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