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Trisurf Monte Carlo simulator

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2014-05-13

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2014-05-06

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2014-04-30

Constant volume works. CAVEAT: in centermass I had to recalculate all norma...

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2014-04-30

Debugged so it does not segfaults. It seems it keeps volume constant in one...

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2014-04-30

Debugged vertexmove. testing bondflip.

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2014-04-29

Bondflip doesnt segfaults anymore. Bondflip is disabled, debugging vertexmove

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2014-04-29

Constant volume in bondflip need lots of debugging

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2014-04-28

Added most important missing files

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2014-04-28

Only reaction on successful acceptance of MC step needs to be programmed.

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2014-04-28

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2014-04-28

Before adding constant volume subrutines

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2014-04-28

Did major change in vesicle datastructure. Added tape information into vesi...

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2014-04-28

Merge branch 'trout-rbc'

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2014-04-25

Added extra calculation of Kc from 3<=l<=6

trout-rbc

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2014-04-24

added 3 different calculations for Kc

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2014-04-24

Kc calculation seems to work. Performance issues persists.

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2014-04-23

in debuggingg ptrocedure

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2014-04-23

Calculating Kc. Needs debugging.

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2014-04-21

Added complex spherical harmonics.

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2014-04-17

Changed atan to atan2 for transfroming coordinates from cartesian to spheri...

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2014-04-16

Output for spherical harmonics testing added.

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2014-04-11

Merge branch 'trout-rbc' of https://bitbucket.org/samop/trisurf-ng into tro...

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2014-04-11

Nekaj malega. Ne veva več kaj.

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2014-04-10

Added possibility to skip calculations of spherical harmonics. Fixed docume...

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2014-04-09

Added spherical harmonics as-is into rbc

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2014-04-07

added statistics output to the outer loop

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2014-04-06

Gyration tensor calculations

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2014-04-02

In cell.c changed comparison between vertices in a cell from idx to pointer...

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2014-03-26

pswitch can be changed on the fly.

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2014-03-25

Added nucleus. Better initial configuration of filaments.

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2014-03-24

Added dmin_interspecies.

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2014-03-24

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2014-03-21

Merge branch 'trisurf-polyel'

povray

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2014-03-21

Merge with trout-rnc.

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2014-03-21

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2014-03-21

Filament inside the vesicle added and debugged. Testing time...

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2014-03-19

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2014-03-18

Adding ending energy to filaments. In progress. Continue in single_filament...

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2014-03-14

Added filaments inside the vesicle. TODO: tape etc.

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2014-03-11

Fixed counting of iterations when invoked with --reset-iteration-count

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2014-03-11

Fixed bugs when dump file is missing. Prepared flags for setting filenames

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2014-03-10

Just some comments and tape parsing.

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2014-03-10

added assigning new values to restore from dump

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2014-03-10

not using global force_from_tape

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2014-03-08

small fix in reset-iteration-count

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2014-03-08

Merge branch 'trisurf-polyel'

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2014-03-08

Parsing command line arguments is still kind-of messy, but it workds for fo...

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2014-03-08

continuation s working. now reset counter is needed

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2014-03-08

tape fixed, output has additional timestamp, ncurrent iteration is dumped a...

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2014-03-08

Merged with dump-state. Added some arg switches that need to be inished

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