Trisurf Monte Carlo simulator
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Samo Penic
2016-07-10 8e345370c7846bb5592fb639a6ff91a8abbeef00
2014-04-24 Samo Penic
added 3 different calculations for Kc
tree@ 22cdfd commitdiff
2014-04-24 Samo Penic
Kc calculation seems to work. Performance issues persists.
tree@ 9f2ad6 commitdiff
2014-04-23 Samo Penic
in debuggingg ptrocedure
tree@ 0ee39c commitdiff
2014-04-23 Samo Penic
Calculating Kc. Needs debugging.
tree@ f06f5f commitdiff
2014-04-21 Samo Penic
Added complex spherical harmonics.
tree@ 459ff9 commitdiff
2014-04-17 Samo Penic
Changed atan to atan2 for transfroming coordinates from cartesian to spheri...
tree@ e9c87e commitdiff
2014-04-16 mihaf
Output for spherical harmonics testing added.
tree@ 5bb6bb commitdiff
2014-04-11 mihaf
Merge branch 'trout-rbc' of https://bitbucket.org/samop/trisurf-ng into tro...
tree@ 091f7d commitdiff
2014-04-11 mihaf
Nekaj malega. Ne veva več kaj.
tree@ 611412 commitdiff
2014-04-10 Samo Penic
Added possibility to skip calculations of spherical harmonics. Fixed docume...
tree@ 632960 commitdiff
2014-04-09 Samo Penic
Added spherical harmonics as-is into rbc
tree@ dc77e8 commitdiff
2014-04-07 Samo Penic
added statistics output to the outer loop
tree@ 37d14a commitdiff
2014-04-06 Samo Penic
Gyration tensor calculations
tree@ 01d871 commitdiff
2014-04-02 mihaf
In cell.c changed comparison between vertices in a cell from idx to pointer...
tree@ 555fd8 commitdiff
2014-03-26 mihaf
pswitch can be changed on the fly.
tree@ bc9583 commitdiff
2014-03-25 mihaf
Added nucleus. Better initial configuration of filaments.
tree@ fe24d2 commitdiff
2014-03-24 mihaf
Added dmin_interspecies.
tree@ ea1cce commitdiff
2014-03-24 Samo Penic
Fix.
tree@ 144784 commitdiff
2014-03-21 Samo Penic
Merge with trout-rnc.
tree@ 42641c commitdiff
2014-03-21 mihaf
Little add.
tree@ 402e8f commitdiff
2014-03-21 mihaf
Filament inside the vesicle added and debugged. Testing time...
tree@ bcf455 commitdiff
2014-03-19 mihaf
continuing...
tree@ b30f45 commitdiff
2014-03-18 mihaf
Adding ending energy to filaments. In progress. Continue in single_filament...
tree@ 58230a commitdiff
2014-03-14 mihaf
Added filaments inside the vesicle. TODO: tape etc.
tree@ 624f81 commitdiff
2014-03-11 Samo Penic
Fixed counting of iterations when invoked with --reset-iteration-count
tree@ aab4ad commitdiff
2014-03-11 Samo Penic
Fixed bugs when dump file is missing. Prepared flags for setting filenames
tree@ 3f5c83 commitdiff
2014-03-10 mihaf
Just some comments and tape parsing.
tree@ 2dcc65 commitdiff
2014-03-10 mihaf
added assigning new values to restore from dump
tree@ d9cb01 commitdiff
2014-03-10 mihaf
not using global force_from_tape
tree@ 152052 commitdiff
2014-03-08 Samo Penic
small fix in reset-iteration-count
tree@ 80887d commitdiff
2014-03-08 Samo Penic
Parsing command line arguments is still kind-of messy, but it workds for fo...
tree@ 8a6614 commitdiff
2014-03-08 Samo Penic
continuation s working. now reset counter is needed
tree@ 626811 commitdiff
2014-03-08 Samo Penic
tape fixed, output has additional timestamp, ncurrent iteration is dumped a...
tree@ 1ab449 commitdiff
2014-03-08 Samo Penic
Merged with dump-state. Added some arg switches that need to be inished
tree@ 0fb40c commitdiff
2014-03-08 Samo Penic
Merged branches polyel with constant volume
tree@ 1153c1 commitdiff
2014-03-08 Samo Penic
debugged seg_fault. Found error in io.h. However, it is u...
tree@ cef6ca commitdiff
2014-03-08 Samo Penic
It seems that bondlip is debugged. Still, recommend testing
tree@ 7efbb1 commitdiff
2014-03-08 Samo Penic
backuping vtxes complete. debugging bondflip
tree@ 2870ab commitdiff
2014-03-07 mihaf
finished constant volume. Problems still exists.
tree@ 414b8a commitdiff
2014-03-07 mihaf
Changed bondflip. lm, lp found before and only once
tree@ b866cf commitdiff
2014-03-07 mihaf
Many fixes, before changing bondflip. triangles are still calculated in ts_...
tree@ e86357 commitdiff
2014-03-06 Samo Penic
Started with arg parsing
tree@ 083e03 commitdiff
2014-03-06 Samo Penic
Dump and restore complete and debugged. Still, use with caution
tree@ 86f5e7 commitdiff
2014-03-06 Samo Penic
Fixed a bug in vertex reinit. Still buggy.
tree@ a37ba2 commitdiff
2014-03-06 Samo Penic
Fixed a bug. added cells
tree@ 063289 commitdiff
2014-03-06 Samo Penic
Dump state seems to work
tree@ 3c1ac1 commitdiff
2014-03-05 Samo Penic
First step in dump and restore. Grafted vtx still missing in the process
tree@ e9eab4 commitdiff
2014-02-27 mihaf
Bug found and removed: polys now also translated when origin moves to the c...
tree@ 3a018d commitdiff
2014-02-21 Miha
Removed harmonic potential between poly-monomers for now. Added min and max...
tree@ 304510 commitdiff
2014-02-21 mihaf
Nothing special.
tree@ 4a1b27 commitdiff
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