Trisurf Monte Carlo simulator
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Samo Penic
2016-07-05 8c91d2bcad7df7c647f1379483673183329ddfe8
2016-07-05 Samo Penic
Fixed some bugs in cluster.c, added a line in cluster.h
tree@ 8c91d2 commitdiff
2016-07-05 Samo Penic
Merge branch 'nirgov' of bitbucket.org:samop/trisurf-ng into nirgov
tree@ dd4e18 commitdiff
2016-07-05 Samo Penic
Added stub function for clustering
tree@ 62b11d commitdiff
2016-07-05 Samo Penic
Merge branch 'clustercount' into nirgov
tree@ f6bc99 commitdiff
2016-07-04 Samo Penic
Small addition, not sure if it is necessary
tree@ c37ddc commitdiff
2016-07-04 Samo Penic
Small addition, not sure if it is necessary
tree@ 14779b commitdiff
2016-07-04 Samo Penic
cluster.c rewritten from memory
tree@ b4c13e commitdiff
2016-07-04 Samo Penic
Forgot to commit cluster.c, now it is loast and I am rewritting. Step 1: cr...
tree@ 92b76b commitdiff
2016-07-03 root
Clustering?
tree@ 35efb0 commitdiff
2016-07-03 Samo Penic
Tried to made all functionality for clustering. Not debugged and will proba...
tree@ 759169 commitdiff
2016-07-03 Samo Penic
Prepared skeleton for cluster counting routines
tree@ 69a174 commitdiff
2016-07-03 Samo Penic
fixed some of the issues while reconstructing wesicles. Added Nbw/Nb metric...
tree@ 89434d commitdiff
2016-07-03 Samo Penic
Stated to write tspoststat.c
tree@ 22a18c commitdiff
2016-07-03 Samo Penic
Difference in energy still persists.
tree@ 38ed80 commitdiff
2016-07-03 Samo Penic
restoring vertices with spontaneous curvatures seems to work, however, the ...
tree@ def8b5 commitdiff
2016-06-22 Samo Penic
Merge with paraview's branch. Added triangles as cells for visualization
tree@ 9447bd commitdiff
2016-06-21 Samo Penic
Removed accidentaly added spontaneous curvature settings.
tree@ f3d3cb commitdiff
2016-06-21 Samo Penic
Added plane
tree@ 8db203 commitdiff
2016-06-21 Samo Penic
Testing and fixes
tree@ 032273 commitdiff
2016-06-21 Samo Penic
Fix in number of spontaneous curvature vertices calculation
tree@ eb9583 commitdiff
2016-06-21 Samo Penic
Change in location of setting spontaneous curvature. Now it is done in init...
tree@ e5858f commitdiff
2016-06-07 Samo Penic
Fixed energy calculations
tree@ 5c64e2 commitdiff
2016-06-07 Samo Penic
Added spontaneous curv.
tree@ 45c708 commitdiff
2016-06-02 Samo Penic
ConstVol and ConstArea area+volume are now also in the snapshost. Fix in ti...
tree@ 49981c commitdiff
2016-06-02 Samo Penic
Changed define in initial_distribution.h from A0 to DEF_A0 to avoid possibl...
tree@ fab2ad commitdiff
2016-06-01 Samo Penic
Statistics.csv and ulm2.dat are being appended if simulations are restarting
tree@ ac9826 commitdiff
2016-05-31 Samo Penic
Fix in vertexmove. Macro was not working
tree@ bac004 commitdiff
2016-05-31 Samo Penic
Use nucleus displaced centre in vertex move
tree@ 5c3143 commitdiff
2016-05-31 Samo Penic
Nucleus translates with the vesicle. Dump and restore includes optional <nu...
tree@ 4891eb commitdiff
2016-05-27 Samo Penic
Added examples to help
tree@ c4178c commitdiff
2016-05-27 Samo Penic
Added some basic help on flags. Unformatted.
tree@ ba73ab commitdiff
2016-05-25 Samo Penic
Merge branch 'master' of bitbucket.org:samop/trisurf-ng with work done on r...
tree@ aafd67 commitdiff
2016-05-25 Samo Penic
ulm2 calculations in tsmeasure.c
tree@ fcfb89 commitdiff
2016-05-24 Samo Penic
Removed printf in restore.c
tree@ f62178 commitdiff
2016-05-24 Samo Penic
Merge branch 'master' of bitbucket.org:samop/trisurf-ng
tree@ 3f5658 commitdiff
2016-05-24 Samo Penic
Moved stop(kill) command to runner
tree@ f06659 commitdiff
2016-05-24 Samo Penic
A fix in restoring from snapshot when filaments are used
tree@ 301c87 commitdiff
2016-05-24 Samo Penic
From snapshots, raw tape configuration is extracted and written into tape f...
tree@ cc95bd commitdiff
2016-05-20 Samo Penic
Removed neigh_test.c
tree@ 37051d commitdiff
2016-05-20 Samo Penic
Minimal changes to trisurf core to permit the trout rbc simulations with el...
tree@ 37791b commitdiff
2016-05-18 Samo Penic
Fix in memory leak. There were also leaks in the old code probably.
tree@ 701026 commitdiff
2016-05-18 Samo Penic
A fix in free in tsmeasure.
tree@ d760b6 commitdiff
2016-05-18 Samo Penic
Started valgrinding. Memory leaks are still present
tree@ 002b70 commitdiff
2016-05-18 Samo Penic
Improved tsmeasure. Found a nasty bug in trisurf regarding snapshot accurac...
tree@ aad500 commitdiff
2016-05-18 Samo Penic
Starting with tsmeasure... Prototype done
tree@ f4d6ca commitdiff
2016-05-15 Samo Penic
Added -v flag to trisurf executable
tree@ fd8126 commitdiff
2016-05-15 Samo Penic
Fix in reading .status file.
tree@ bb2074 commitdiff
2016-05-13 Samo Penic
Added many fixes for reruning the simulations, starting from tapes, added C...
tree@ 3d0247 commitdiff
2016-05-13 Samo Penic
Fix in trisurf output, inhibiting print of successful reconstruction. Multi...
tree@ bd826d commitdiff
2016-05-06 Samo Penic
Fixed handling of inline functions with newr versions of gcc. Added -fgnu89...
tree@ 7a11a7 commitdiff
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