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Trisurf Monte Carlo simulator

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2016-06-21

Testing and fixes

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2016-06-21

Fix in number of spontaneous curvature vertices calculation

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2016-06-21

Change in location of setting spontaneous curvature. Now it is done in init...

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2016-06-14

Updated trisurfmanager file. Added remote computer capabilities. Added web ...

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2016-06-14

Fixed restarting when inititer is not 0

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2016-06-07

Fixed energy calculations

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2016-06-07

Added spontaneous curv.

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2016-06-02

Another fix in previous questionable commit

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2016-06-02

questionable commit -- the ETA is calculated using only last two entries in...

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2016-06-02

Modification in statistics.py -- filename can be specified to be ulm2.csv, ...

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2016-06-02

ConstVol and ConstArea area+volume are now also in the snapshost. Fix in ti...

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2016-06-02

Changed define in initial_distribution.h from A0 to DEF_A0 to avoid possibl...

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2016-06-01

combined statistics output to file

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2016-06-01

Replacing statistics...

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2016-06-01

Added statistics combining python script. Rudimentary at the moment.

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2016-06-01

Statistics.csv and ulm2.dat are being appended if simulations are restarting

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2016-05-31

Fix in vertexmove. Macro was not working

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2016-05-31

Use nucleus displaced centre in vertex move

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2016-05-31

Nucleus translates with the vesicle. Dump and restore includes optional <nu...

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2016-05-28

removing extra print.

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2016-05-28

A small fix. If a continuation of simulation with a starting snapshot is re...

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2016-05-27

Added examples to help

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2016-05-27

Added some basic help on flags. Unformatted.

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2016-05-25

Merge branch 'master' of bitbucket.org:samop/trisurf-ng with work done on r...

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2016-05-25

ulm2 calculations in tsmeasure.c

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2016-05-24

Removed printf in restore.c

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2016-05-24

Merge branch 'master' of bitbucket.org:samop/trisurf-ng

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2016-05-24

Moved stop(kill) command to runner

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2016-05-24

Added automated python script system-wide installation in build.sh

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2016-05-24

A fix in restoring from snapshot when filaments are used

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2016-05-24

Removed some non essential and experimental files

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2016-05-24

Removed aclocal.m4 from git repo

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2016-05-24

Added kill switch -k to tsmgr

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2016-05-24

From snapshots, raw tape configuration is extracted and written into tape f...

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2016-05-20

Removed neigh_test.c

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2016-05-20

Minimal changes to trisurf core to permit the trout rbc simulations with el...

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2016-05-18

Fix in memory leak. There were also leaks in the old code probably.

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2016-05-18

A fix in free in tsmeasure.

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2016-05-18

Started valgrinding. Memory leaks are still present

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2016-05-18

Improved tsmeasure. Found a nasty bug in trisurf regarding snapshot accurac...

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2016-05-18

Starting with tsmeasure... Prototype done

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2016-05-18

snapshot symlinked to initial_snapshot.vtu. This eliminates possibility of ...

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2016-05-17

Fixes error occuring when statistics.csv is empty.

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2016-05-17

Fix in psutil. Versions prior to 2.0.0 used different way to access informa...

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2016-05-16

Added comment about psutil version

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2016-05-16

build.sh script to help automate build procedure

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2016-05-16

Again... fix in getStatus. proc.status is a function in newere versions of...

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2016-05-15

Added function that finds trisurf version from its executable output string...

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2016-05-15

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2016-05-15

Added -v flag to trisurf executable

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