Trisurf Monte Carlo simulator
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Samo Penic
2019-10-19 4ca00dc38c72f67dc714fbb45b3006afec097c9c
2016-07-03 Samo Penic
restoring vertices with spontaneous curvatures seems to work, however, the ...
tree@ def8b5 commitdiff
2016-06-22 Samo Penic
Merge with paraview's branch. Added triangles as cells for visualization
tree@ 9447bd commitdiff
2016-06-21 Samo Penic
Removed accidentaly added spontaneous curvature settings.
tree@ f3d3cb commitdiff
2016-06-21 Samo Penic
Removed accidentaly added spontaneous curvature settings.
tree@ 7e4c90 commitdiff
2016-06-21 Samo Penic
Added plane
tree@ 8db203 commitdiff
2016-06-21 Samo Penic
Testing and fixes
tree@ 032273 commitdiff
2016-06-21 Samo Penic
Fix in number of spontaneous curvature vertices calculation
tree@ eb9583 commitdiff
2016-06-21 Samo Penic
Change in location of setting spontaneous curvature. Now it is done in init...
tree@ e5858f commitdiff
2016-06-14 Samo Penic
Updated trisurfmanager file. Added remote computer capabilities. Added web ...
tree@ 7169f1 commitdiff
2016-06-14 Samo Penic
Fixed restarting when inititer is not 0
tree@ a17e91 commitdiff
2016-06-07 Samo Penic
Fixed energy calculations
tree@ 5c64e2 commitdiff
2016-06-07 Samo Penic
Added spontaneous curv.
tree@ 45c708 commitdiff
2016-06-02 Samo Penic
Another fix in previous questionable commit
tree@ ddb86f commitdiff
2016-06-02 Samo Penic
questionable commit -- the ETA is calculated using only last two entries in...
tree@ 6568b3 commitdiff
2016-06-02 Samo Penic
Modification in statistics.py -- filename can be specified to be ulm2.csv, ...
tree@ 08a4a2 commitdiff
2016-06-02 Samo Penic
ConstVol and ConstArea area+volume are now also in the snapshost. Fix in ti...
tree@ 49981c commitdiff
2016-06-02 Samo Penic
Changed define in initial_distribution.h from A0 to DEF_A0 to avoid possibl...
tree@ fab2ad commitdiff
2016-06-01 Samo Penic
combined statistics output to file
tree@ f3a6c1 commitdiff
2016-06-01 Samo Penic
Replacing statistics...
tree@ bc0dc5 commitdiff
2016-06-01 Samo Penic
Added statistics combining python script. Rudimentary at the moment.
tree@ 67749c commitdiff
2016-06-01 Samo Penic
Statistics.csv and ulm2.dat are being appended if simulations are restarting
tree@ ac9826 commitdiff
2016-05-31 Samo Penic
Fix in vertexmove. Macro was not working
tree@ bac004 commitdiff
2016-05-31 Samo Penic
Use nucleus displaced centre in vertex move
tree@ 5c3143 commitdiff
2016-05-31 Samo Penic
Nucleus translates with the vesicle. Dump and restore includes optional <nu...
tree@ 4891eb commitdiff
2016-05-28 Samo Penic
removing extra print.
tree@ 24d722 commitdiff
2016-05-28 Samo Penic
A small fix. If a continuation of simulation with a starting snapshot is re...
tree@ 2f74e4 commitdiff
2016-05-27 Samo Penic
Added examples to help
tree@ c4178c commitdiff
2016-05-27 Samo Penic
Added some basic help on flags. Unformatted.
tree@ ba73ab commitdiff
2016-05-25 Samo Penic
Merge branch 'master' of bitbucket.org:samop/trisurf-ng with work done on r...
tree@ aafd67 commitdiff
2016-05-25 Samo Penic
ulm2 calculations in tsmeasure.c
tree@ fcfb89 commitdiff
2016-05-24 Samo Penic
Removed printf in restore.c
tree@ f62178 commitdiff
2016-05-24 Samo Penic
Merge branch 'master' of bitbucket.org:samop/trisurf-ng
tree@ 3f5658 commitdiff
2016-05-24 Samo Penic
Moved stop(kill) command to runner
tree@ f06659 commitdiff
2016-05-24 Samo Penic
Added automated python script system-wide installation in build.sh
tree@ f4a437 commitdiff
2016-05-24 Samo Penic
A fix in restoring from snapshot when filaments are used
tree@ 301c87 commitdiff
2016-05-24 Samo Penic
Removed some non essential and experimental files
tree@ 24cf44 commitdiff
2016-05-24 Samo Penic
Removed aclocal.m4 from git repo
tree@ 939214 commitdiff
2016-05-24 Samo Penic
Added kill switch -k to tsmgr
tree@ dfa2df commitdiff
2016-05-24 Samo Penic
From snapshots, raw tape configuration is extracted and written into tape f...
tree@ cc95bd commitdiff
2016-05-20 Samo Penic
Removed neigh_test.c
tree@ 37051d commitdiff
2016-05-20 Samo Penic
Minimal changes to trisurf core to permit the trout rbc simulations with el...
tree@ 37791b commitdiff
2016-05-18 Samo Penic
Fix in memory leak. There were also leaks in the old code probably.
tree@ 701026 commitdiff
2016-05-18 Samo Penic
A fix in free in tsmeasure.
tree@ d760b6 commitdiff
2016-05-18 Samo Penic
Started valgrinding. Memory leaks are still present
tree@ 002b70 commitdiff
2016-05-18 Samo Penic
Improved tsmeasure. Found a nasty bug in trisurf regarding snapshot accurac...
tree@ aad500 commitdiff
2016-05-18 Samo Penic
Starting with tsmeasure... Prototype done
tree@ f4d6ca commitdiff
2016-05-18 Samo Penic
snapshot symlinked to initial_snapshot.vtu. This eliminates possibility of ...
tree@ 354145 commitdiff
2016-05-17 Samo Penic
Fixes error occuring when statistics.csv is empty.
tree@ d665c0 commitdiff
2016-05-17 Samo Penic
Fix in psutil. Versions prior to 2.0.0 used different way to access informa...
tree@ 9aa037 commitdiff
2016-05-16 Samo Penic
Added comment about psutil version
tree@ 56ba2f commitdiff
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