Trisurf Monte Carlo simulator
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Samo Penic
2019-02-27 2eaa9ed304d3cf22883db99a41a277cde6deb617
2016-06-01 Samo Penic
Added statistics combining python script. Rudimentary at the moment.
tree@ 67749c commitdiff
2016-06-01 Samo Penic
Statistics.csv and ulm2.dat are being appended if simulations are restarting
tree@ ac9826 commitdiff
2016-05-31 Samo Penic
Fix in vertexmove. Macro was not working
tree@ bac004 commitdiff
2016-05-31 Samo Penic
Use nucleus displaced centre in vertex move
tree@ 5c3143 commitdiff
2016-05-31 Samo Penic
Nucleus translates with the vesicle. Dump and restore includes optional <nu...
tree@ 4891eb commitdiff
2016-05-28 Samo Penic
removing extra print.
tree@ 24d722 commitdiff
2016-05-28 Samo Penic
A small fix. If a continuation of simulation with a starting snapshot is re...
tree@ 2f74e4 commitdiff
2016-05-27 Samo Penic
Added examples to help
tree@ c4178c commitdiff
2016-05-27 Samo Penic
Added some basic help on flags. Unformatted.
tree@ ba73ab commitdiff
2016-05-25 Samo Penic
Merge branch 'master' of bitbucket.org:samop/trisurf-ng with work done on r...
tree@ aafd67 commitdiff
2016-05-25 Samo Penic
ulm2 calculations in tsmeasure.c
tree@ fcfb89 commitdiff
2016-05-24 Samo Penic
Removed printf in restore.c
tree@ f62178 commitdiff
2016-05-24 Samo Penic
Merge branch 'master' of bitbucket.org:samop/trisurf-ng
tree@ 3f5658 commitdiff
2016-05-24 Samo Penic
Moved stop(kill) command to runner
tree@ f06659 commitdiff
2016-05-24 Samo Penic
Added automated python script system-wide installation in build.sh
tree@ f4a437 commitdiff
2016-05-24 Samo Penic
A fix in restoring from snapshot when filaments are used
tree@ 301c87 commitdiff
2016-05-24 Samo Penic
Removed some non essential and experimental files
tree@ 24cf44 commitdiff
2016-05-24 Samo Penic
Removed aclocal.m4 from git repo
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2016-05-24 Samo Penic
Added kill switch -k to tsmgr
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2016-05-24 Samo Penic
From snapshots, raw tape configuration is extracted and written into tape f...
tree@ cc95bd commitdiff
2016-05-20 Samo Penic
Removed neigh_test.c
tree@ 37051d commitdiff
2016-05-20 Samo Penic
Minimal changes to trisurf core to permit the trout rbc simulations with el...
tree@ 37791b commitdiff
2016-05-18 Samo Penic
Fix in memory leak. There were also leaks in the old code probably.
tree@ 701026 commitdiff
2016-05-18 Samo Penic
A fix in free in tsmeasure.
tree@ d760b6 commitdiff
2016-05-18 Samo Penic
Started valgrinding. Memory leaks are still present
tree@ 002b70 commitdiff
2016-05-18 Samo Penic
Improved tsmeasure. Found a nasty bug in trisurf regarding snapshot accurac...
tree@ aad500 commitdiff
2016-05-18 Samo Penic
Starting with tsmeasure... Prototype done
tree@ f4d6ca commitdiff
2016-05-18 Samo Penic
snapshot symlinked to initial_snapshot.vtu. This eliminates possibility of ...
tree@ 354145 commitdiff
2016-05-17 Samo Penic
Fixes error occuring when statistics.csv is empty.
tree@ d665c0 commitdiff
2016-05-17 Samo Penic
Fix in psutil. Versions prior to 2.0.0 used different way to access informa...
tree@ 9aa037 commitdiff
2016-05-16 Samo Penic
Added comment about psutil version
tree@ 56ba2f commitdiff
2016-05-16 Samo Penic
build.sh script to help automate build procedure
tree@ d84529 commitdiff
2016-05-16 Samo Penic
Again... fix in getStatus. proc.status is a function in newere versions of...
tree@ 2ded03 commitdiff
2016-05-15 Samo Penic
Added function that finds trisurf version from its executable output string...
tree@ a3f6b7 commitdiff
2016-05-15 Samo Penic
Nicer output
tree@ 3b83db commitdiff
2016-05-15 Samo Penic
Added -v flag to trisurf executable
tree@ fd8126 commitdiff
2016-05-15 Samo Penic
Added a small fix in trisurf
tree@ 25296b commitdiff
2016-05-15 Samo Penic
Added check if trisurf executable exists in path, ETA is empty or N/A at ap...
tree@ 38cb4a commitdiff
2016-05-15 Samo Penic
Added a file paramikoTest.py, an attempt to make remote connection
tree@ e1b97d commitdiff
2016-05-15 Samo Penic
Added better help and raw statistics output
tree@ 5f4aea commitdiff
2016-05-15 Samo Penic
in README.md changed some instructions what to install for python wrapper
tree@ 08d2f8 commitdiff
2016-05-15 Samo Penic
Fix in reading .status file.
tree@ bb2074 commitdiff
2016-05-13 Samo Penic
Added many fixes for reruning the simulations, starting from tapes, added C...
tree@ 3d0247 commitdiff
2016-05-13 Samo Penic
Changed the way tsmgr is called
tree@ 9f5ff5 commitdiff
2016-05-13 Samo Penic
Fix in trisurf output, inhibiting print of successful reconstruction. Multi...
tree@ bd826d commitdiff
2016-05-06 Samo Penic
Fixed handling of inline functions with newr versions of gcc. Added -fgnu89...
tree@ 7a11a7 commitdiff
2016-04-08 Samo Penic
Fix in comment in main.c
tree@ 57f830 commitdiff
2016-04-07 Samo Penic
Fix in ETA calculation. Redirected stdout of trisurf into null.
tree@ fca8d6 commitdiff
2016-04-07 Samo Penic
Added option to include trisurf runtime arguments in the main configuration...
tree@ b122c4 commitdiff
2016-04-07 Samo Penic
Starting trisurf in background, however, all the files needs to be in the r...
tree@ 47d80d commitdiff
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