| | |
| | | |
| | | #include<stdarg.h> |
| | | #include<stdio.h> |
| | | |
| | | #include<gsl/gsl_complex.h> |
| | | /* @brief This is a header file, defining general constants and structures. |
| | | * @file header.h |
| | | * @author Samo Penic |
| | |
| | | #define TS_FAIL 1 |
| | | |
| | | /* CONSTANTS */ |
| | | |
| | | #define TS_ID_FILAMENT 1 |
| | | |
| | | /* DATA TYPES */ |
| | | /** @brief Sets the default datatype for ts_double |
| | |
| | | ts_uint idx; |
| | | ts_vertex *vtx1; |
| | | ts_vertex *vtx2; |
| | | ts_double bond_length; |
| | | ts_double bond_length_dual; |
| | | ts_bool tainted; |
| | | ts_double bond_length; |
| | | ts_double bond_length_dual; |
| | | ts_bool tainted; //TODO: remove |
| | | ts_double energy; |
| | | ts_double x,y,z; |
| | | }; |
| | | typedef struct ts_bond ts_bond; |
| | | |
| | |
| | | ts_double dcell; |
| | | ts_double shift; |
| | | ts_double max_occupancy; |
| | | ts_double dmin_interspecies; |
| | | } ts_cell_list; |
| | | |
| | | |
| | | typedef struct { |
| | | ts_uint l; |
| | | ts_double **ulm; |
| | | gsl_complex **ulmComplex; |
| | | ts_double **sumUlm2; |
| | | ts_uint N; |
| | | ts_double **co; |
| | |
| | | ts_double cm[3]; |
| | | ts_double volume; |
| | | ts_spharm *sphHarmonics; |
| | | |
| | | // Polymers outside the vesicle and attached to the vesicle membrane (polymer brush): |
| | | ts_poly_list *poly_list; |
| | | // Filaments inside the vesicle (not attached to the vesicel membrane: |
| | | ts_poly_list *filament_list; |
| | | |
| | | ts_double spring_constant; |
| | | ts_double pressure; |
| | | ts_int pswitch; |
| | | } ts_vesicle; |
| | | |
| | | ts_double R_nucleus; |
| | | |
| | | } ts_vesicle; |
| | | |
| | | |
| | | |