Changes in main loop. It allows setting inner, outer loop and initial mc sw...

Samo Penic

2013-11-04 d7a113d890064e18aa9f4267c33ac71348c6ba98

 src/main.c

@@ -2,8 +2,14 @@
#include<math.h>
#include "general.h"
#include "vertex.h"
//#include "io.h"
//#include "initial_timestep.h"
#include "bond.h"
#include "triangle.h"
#include "cell.h"
#include "vesicle.h"
#include "io.h"
#include "initial_distribution.h"
#include "frame.h"
#include "timestep.h"

/** Entrance function to the program
  * @param argv is a number of parameters used in program call (including the program name
@@ -12,16 +18,57 @@
*/

int main(int argv, char *argc[]){
ts_uint inititer,mcsweeps, iterations;
ts_vesicle *vesicle;
/* THIS SHOULD GO INTO UNIT TEST
ts_bool retval;
ts_vertex_list *vlist=init_vertex_list(5);
    ts_vertex_list *vlist=init_vertex_list(5);
ts_vertex_list *vlist1;
ts_bond_list *blist=init_bond_list();
ts_triangle_list *tlist=init_triangle_list();
ts_cell_list *clist=init_cell_list(3,3,3,0.3);


retval=vtx_add_neighbour(VTX(vlist,1),VTX(vlist,0));
retval=vtx_add_cneighbour(blist,vlist->vtx[1],vlist->vtx[0]);
if(retval==TS_FAIL) printf("1. already a member or vertex is null!\n");
retval=vtx_add_neighbour(VTX(vlist,0),VTX(vlist,1));
if(retval==TS_FAIL) printf("2. already a member or vertex is null!\n");

retval=vtx_add_neighbour(vlist->vtx[0],vlist->vtx[1]);
if(retval==TS_FAIL) printf("2. already a member or vertex is null!\n");
fprintf(stderr,"Was here");
retval=vtx_remove_neighbour(vlist->vtx[1],vlist->vtx[0]);
vtx_add_neighbour(vlist->vtx[0],vlist->vtx[1]);
fprintf(stderr,"Was here too!\n");

vlist->vtx[0]->x=1.0;
vlist->vtx[0]->x=1.1;
vlist1=vertex_list_copy(vlist);
bond_add(blist, vlist->vtx[1],vlist->vtx[0]);
triangle_add(tlist,vlist->vtx[1],vlist->vtx[2],vlist->vtx[3]);

triangle_add(tlist,vlist->vtx[1],vlist->vtx[2],vlist->vtx[3]);

printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
cell_add_vertex(clist->cell[0], vlist->vtx[0]);
printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
printf("Cell idx=1 has vertex[0] has x coordinate=%e\n",clist->cell[0]->vertex[0]->x);
cell_list_cell_occupation_clear(clist);
printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
cell_add_vertex(clist->cell[0], vlist->vtx[0]);


triangle_list_free(tlist);
bond_list_free(blist);
vtx_list_free(vlist);
printf("Done.\n");
cell_list_free(clist);

vtx_list_free(vlist1);
printf("Tests complete.\n");
*/
vesicle=parsetape(&mcsweeps, &inititer, &iterations);
run_simulation(vesicle, mcsweeps, inititer, iterations);

write_master_xml_file("test.pvd");
write_dout_fcompat_file(vesicle,"dout");
vesicle_free(vesicle);

return 0; //program finished perfectly ok. We return 0.
}