First attempt to add additional info to the vtu files as formatted xml. Peg...

Samo Penic

2016-02-15 854cb6571e100b4259ca70861a226a0d8a14c2c1

 src/spherical_trisurf.c

@@ -60,12 +60,23 @@
calculateYlmi(vesicle);
calculateUlm(vesicle);

//preloop:
ts_double vmsr, bfsr;
for(i=0;i<1000;i++){
   cell_occupation(vesicle);
   for(j=0;j<1000;j++){
      single_timestep(vesicle, &vmsr, &bfsr);
   }	
   centermass(vesicle);
   fprintf(stderr, "Preloop %d completed.\n",i+1);
}

nmax=1000;
for(i=0;i<nmax;i++){
   for(j=0;j<200;j++){
      cell_occupation(vesicle);
      for(k=0;k<5;k++){
      single_timestep(vesicle);
      single_timestep(vesicle, &vmsr, &bfsr);
      }
      centermass(vesicle);
   }   
@@ -93,26 +104,3 @@



ts_bool saveAvgUlm2(ts_vesicle *vesicle){

   FILE *fh;
	
   fh=fopen("sph2out.dat", "w");
   if(fh==NULL){
      err("Cannot open file %s for writing");
      return TS_FAIL;
   }

   ts_spharm *sph=vesicle->sphHarmonics;
   ts_int i,j;
   fprintf(fh,"l,\tm,\tulm^2avg\n");
   for(i=0;i<sph->l;i++){
          for(j=0;j<2*i+1;j++){
      fprintf(fh,"%d,\t%d,\t%e\n", i, j-i, sph->sumUlm2[i][j]/(ts_double)sph->N);

          }
    fprintf(fh,"\n");
   }
   fclose(fh);
   return TS_SUCCESS;
}