Trisurf Monte Carlo simulator
Samo Penic
2012-06-07 79fc9ce029be3e91d3249a654f84c7a1ce1ff9ee
src/main.c
@@ -2,8 +2,14 @@
#include<math.h>
#include "general.h"
#include "vertex.h"
//#include "io.h"
//#include "initial_timestep.h"
#include "bond.h"
#include "triangle.h"
#include "cell.h"
#include "vesicle.h"
#include "io.h"
#include "initial_distribution.h"
#include "frame.h"
#include "timestep.h"
/** Entrance function to the program
  * @param argv is a number of parameters used in program call (including the program name
@@ -13,15 +19,68 @@
int main(int argv, char *argc[]){
ts_bool retval;
ts_vertex_list *vlist=init_vertex_list(5);
ts_uint i;
    ts_vertex_list *vlist=init_vertex_list(5);
ts_vertex_list *vlist1;
ts_bond_list *blist=init_bond_list();
ts_triangle_list *tlist=init_triangle_list();
ts_cell_list *clist=init_cell_list(3,3,3,0.3);
ts_vesicle *vesicle;
retval=vtx_add_neighbour(VTX(1),VTX(0));
retval=vtx_add_cneighbour(blist,vlist->vtx[1],vlist->vtx[0]);
if(retval==TS_FAIL) printf("1. already a member or vertex is null!\n");
retval=vtx_add_neighbour(VTX(0),VTX(1));
retval=vtx_add_cneighbour(blist,vlist->vtx[0],vlist->vtx[1]);
if(retval==TS_FAIL) printf("2. already a member or vertex is null!\n");
VTX_DATA(1)->x=1.0;
retval=vtx_remove_neighbour(vlist->vtx[0],vlist->vtx[1]);
vtx_add_neighbour(vlist->vtx[0],vlist->vtx[1]);
vlist->vtx[0]->x=1.0;
vlist->vtx[0]->x=1.1;
vlist1=vertex_list_copy(vlist);
bond_add(blist, vlist->vtx[1],vlist->vtx[0]);
triangle_add(tlist,vlist->vtx[1],vlist->vtx[2],vlist->vtx[3]);
triangle_add(tlist,vlist->vtx[1],vlist->vtx[2],vlist->vtx[3]);
printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
cell_add_vertex(clist->cell[0], vlist->vtx[0]);
printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
printf("Cell idx=1 has vertex[0] has x coordinate=%e\n",clist->cell[0]->vertex[0]->x);
cell_list_cell_occupation_clear(clist);
printf("Cell idx=1 has vertices=%u\n",clist->cell[0]->nvertex);
cell_add_vertex(clist->cell[0], vlist->vtx[0]);
triangle_list_free(tlist);
bond_list_free(blist);
vtx_list_free(vlist);
printf("Done.\n");
cell_list_free(clist);
vtx_list_free(vlist1);
printf("Tests complete.\n");
vesicle=initial_distribution_dipyramid(17,60,60,60,0.15);
//parsetape(vesicle,&i);
//these four must come from parsetype!
vesicle->dmax=1.67*1.67;
vesicle->stepsize=0.15;
vesicle->clist->max_occupancy=8;
vesicle->bending_rigidity=25.0;
fprintf(stderr,"xk=%f",vesicle->bending_rigidity);
centermass(vesicle);
cell_occupation(vesicle);
for(i=0;i<10000;i++){
single_timestep(vesicle);
if(i%100==0){
write_vertex_xml_file(vesicle,i/100);
}
}
write_master_xml_file("test.pvd");
write_dout_fcompat_file(vesicle,"dout");
vesicle_free(vesicle);
return 0; //program finished perfectly ok. We return 0.