| | |
| | | ts_vesicle *vesicle; |
| | | ts_tape *tape; |
| | | ts_uint start_iteration=0; |
| | | parse_args(argv,argc); |
| | | ts_fprintf(stdout,"\nStarting program...\n\n"); |
| | | if(force_from_tape){ |
| | | ts_fprintf(stdout,"****************************************************\n"); |
| | | ts_fprintf(stdout,"**** Reinitializing initial geometry from tape *****\n"); |
| | | ts_fprintf(stdout,"****************************************************\n\n"); |
| | | tape=parsetape("tape"); |
| | | vesicle=create_vesicle_from_tape(tape); |
| | | } else { |
| | | force_from_tape=0; |
| | | parse_args(argv,argc); // sets global variable command_line_args (defined in io.h) |
| | | ts_fprintf(stdout,"Starting program...\n\n"); |
| | | if(command_line_args.force_from_tape){ |
| | | ts_fprintf(stdout,"************************************************\n"); |
| | | ts_fprintf(stdout,"**** Generating initial geometry from tape *****\n"); |
| | | ts_fprintf(stdout,"************************************************\n\n"); |
| | | tape=parsetape("tape"); |
| | | vesicle=create_vesicle_from_tape(tape); |
| | | } else { |
| | | |
| | | ts_fprintf(stdout,"**********************************************************************\n"); |
| | | ts_fprintf(stdout,"**** Recreating vesicle from dump file and continuing simulation *****\n"); |
| | | ts_fprintf(stdout,"**********************************************************************\n\n"); |
| | | tape=parsetape("tape"); |
| | | vesicle=restore_state(&start_iteration); |
| | | } |
| | | ts_fprintf(stdout,"**********************************************************************\n"); |
| | | ts_fprintf(stdout,"**** Recreating vesicle from dump file and continuing simulation *****\n"); |
| | | ts_fprintf(stdout,"**********************************************************************\n\n"); |
| | | tape=parsetape("tape"); |
| | | vesicle=restore_state(&start_iteration); |
| | | if(vesicle==NULL){ |
| | | ts_fprintf(stderr, "Dump file does not exist or is not a regular file! Did you mean to invoke trisurf with --force-from-tape option?\n\n"); |
| | | return 1; |
| | | } |
| | | // nove vrednosti iz tapea... |
| | | vesicle->bending_rigidity=tape->xk0; |
| | | vtx_set_global_values(vesicle); |
| | | vesicle->pressure=tape->pressure; |
| | | vesicle->dmax=tape->dmax*tape->dmax; |
| | | poly_assign_filament_xi(vesicle,tape); |
| | | |
| | | run_simulation(vesicle, tape->mcsweeps, tape->inititer, tape->iterations); |
| | | write_master_xml_file("test.pvd"); |
| | | write_dout_fcompat_file(vesicle,"dout"); |
| | | vesicle_free(vesicle); |
| | | tape_free(tape); |
| | | return 0; //program finished perfectly ok. We return 0. |
| | | if(command_line_args.reset_iteration_count) start_iteration=tape->inititer+1; |
| | | else start_iteration++; |
| | | |
| | | if(start_iteration>=tape->iterations){ |
| | | ts_fprintf(stdout, "Simulation already completed. if you want to rerun it try with --force-from-tape or --reset-iteration-count\n\n"); |
| | | return 0; |
| | | } |
| | | } |
| | | |
| | | run_simulation(vesicle, tape->mcsweeps, tape->inititer, tape->iterations, start_iteration); |
| | | write_master_xml_file("test.pvd"); |
| | | write_dout_fcompat_file(vesicle,"dout"); |
| | | vesicle_free(vesicle); |
| | | tape_free(tape); |
| | | return 0; //program finished perfectly ok. We return 0. |
| | | } |