commit | author | age
|
f4d6ca
|
1 |
/* vim: set ts=4 sts=4 sw=4 noet : */ |
SP |
2 |
#include<stdio.h> |
|
3 |
#include<math.h> |
|
4 |
#include<stdlib.h> |
|
5 |
#include "general.h" |
|
6 |
//#include "vertex.h" |
|
7 |
//#include "bond.h" |
|
8 |
//#include "triangle.h" |
|
9 |
//#include "cell.h" |
|
10 |
#include "vesicle.h" |
|
11 |
#include "io.h" |
|
12 |
//#include "initial_distribution.h" |
|
13 |
//#include "frame.h" |
|
14 |
//#include "timestep.h" |
|
15 |
//#include "poly.h" |
|
16 |
#include "sh.h" |
|
17 |
#include "shcomplex.h" |
|
18 |
#include "dumpstate.h" |
|
19 |
#include "restore.h" |
|
20 |
#include <string.h> |
|
21 |
#include <getopt.h> |
|
22 |
#include <sys/stat.h> |
|
23 |
#include <sys/types.h> |
|
24 |
#include <dirent.h> |
|
25 |
#include <errno.h> |
|
26 |
#include <snapshot.h> |
|
27 |
#include<gsl/gsl_complex.h> |
|
28 |
#include<gsl/gsl_complex_math.h> |
|
29 |
|
|
30 |
|
|
31 |
ts_vesicle *restoreVesicle(char *filename){ |
|
32 |
ts_vesicle *vesicle = parseDump(filename); |
|
33 |
return vesicle; |
|
34 |
} |
|
35 |
|
|
36 |
void vesicle_calculate_ulm2(ts_vesicle *vesicle){ |
|
37 |
vesicle->sphHarmonics=complex_sph_init(vesicle->vlist,21); |
|
38 |
vesicle_volume(vesicle); |
|
39 |
preparationSh(vesicle,getR0(vesicle)); |
|
40 |
calculateUlmComplex(vesicle); |
|
41 |
ts_int i,j; |
|
42 |
for(i=0;i<vesicle->sphHarmonics->l;i++){ |
|
43 |
for(j=0;j<2*i+1;j++){ |
|
44 |
printf("%e ", gsl_complex_abs2(vesicle->sphHarmonics->ulmComplex[i][j])); |
|
45 |
} |
|
46 |
} |
|
47 |
printf("\n"); |
|
48 |
|
|
49 |
} |
|
50 |
|
|
51 |
int main(){ |
|
52 |
ts_vesicle *vesicle; |
|
53 |
ts_char *i,*j; |
|
54 |
ts_uint tstep; |
|
55 |
ts_char *number; |
|
56 |
ts_fprintf(stdout,"TRISURF-NG v. %s, compiled on: %s %s.\n", TS_VERSION, __DATE__, __TIME__); |
|
57 |
ts_fprintf(stdout,"Programming done by: Samo Penic and Miha Fosnaric\n"); |
|
58 |
ts_fprintf(stdout,"Released under terms of GPLv3\n"); |
|
59 |
ts_fprintf(stdout,"Starting program...\n\n"); |
|
60 |
DIR *dir = opendir("."); |
|
61 |
if(dir){ |
|
62 |
struct dirent *ent; |
|
63 |
tstep=0; |
|
64 |
while((ent = readdir(dir)) != NULL) |
|
65 |
{ |
|
66 |
i=rindex(ent->d_name,'.'); |
|
67 |
if(i==NULL) continue; |
|
68 |
if(strcmp(i+1,"vtu")==0){ |
|
69 |
j=rindex(ent->d_name,'_'); |
|
70 |
if(j==NULL) continue; |
|
71 |
number=strndup(j+1,j-i); |
|
72 |
quiet=1; |
|
73 |
ts_fprintf(stdout,"timestep: %u filename: %s\n",atoi(number),ent->d_name); |
|
74 |
vesicle=restoreVesicle(ent->d_name); |
|
75 |
vesicle_calculate_ulm2(vesicle); |
|
76 |
tstep++; |
|
77 |
//vesicle_free(vesicle); |
|
78 |
free(number); |
|
79 |
} |
|
80 |
} |
|
81 |
} |
|
82 |
free(dir); |
|
83 |
|
|
84 |
|
|
85 |
|
|
86 |
|
|
87 |
return 0; |
|
88 |
} |
|
89 |
|