| commit | author | age | ||
| eb7d7e | 1 | /* This is a first attempt in implementation of plugins to Trisurf-ng. */ |
| SP | 2 | |
| 3 | /* | |
| 4 | ||
| 085596 | 5 | Options for tape: |
| eb7d7e | 6 | |
| 085596 | 7 | extra_plugin_path = "..." (OPTIONAL) |
| eb7d7e | 8 | |
| 085596 | 9 | vesicle bipyramid { |
| SP | 10 | nshell=23 |
| 11 | } | |
| eb7d7e | 12 | |
| 085596 | 13 | vesicle vtufile { |
| SP | 14 | filename="filename" |
| 15 | } | |
| eb7d7e | 16 | |
| 085596 | 17 | vesicle vtudatabase { |
| SP | 18 | run_id=123 |
| 19 | timestep=999 | |
| 20 | } | |
| eb7d7e | 21 | |
| 085596 | 22 | vesicle properties { |
| SP | 23 | xk0=20 |
| 24 | dmax=1.7 | |
| 25 | dmin_interspecies=1.2 | |
| 26 | stepsize=0.15 | |
| 27 | } | |
| eb7d7e | 28 | |
| 085596 | 29 | space properties { |
| SP | 30 | nxmax=60 |
| 31 | nymax=60 | |
| 32 | nzmax=60 | |
| 33 | } | |
| 34 | ||
| 35 | loop control { | |
| 36 | inner=1000 | |
| 37 | outer=1000 | |
| 38 | } | |
| 39 | ||
| 40 | plugin pressure { | |
| 41 | pressure=10 | |
| 42 | } | |
| 43 | ||
| 44 | plugin constant_volume { | |
| 45 | precision=1e14 | |
| 46 | } | |
| 47 | ||
| 48 | plugin constant_area { | |
| 49 | ||
| 50 | } | |
| 51 | ||
| 52 | plugin confinement_plate { | |
| 53 | distance=5 | |
| 54 | force=10 | |
| 55 | coordinate=2 // 0=x,1=y,2=z | |
| 56 | } | |
| 57 | ||
| 58 | plugin spherical_harmonics { | |
| 59 | lmax=21 | |
| 60 | filename="abc.csv" | |
| 61 | } | |
| 62 | ||
| 63 | plugin spontaneous_curvature { | |
| 64 | c0=2 | |
| 65 | N=100 | |
| 66 | w=10 | |
| 67 | force=3 | |
| 68 | } | |
| 69 | ||
| 70 | plugin filament { | |
| 71 | monomers=100 | |
| 72 | xi=10 | |
| 73 | } | |
| 74 | ||
| 75 | plugin polymer { | |
| 76 | polymers = 100 | |
| 77 | monomers = 10 | |
| 78 | elastic_coefficient=100 | |
| 79 | is_internal = true | |
| 80 | } | |
| 81 | ||
| 82 | plugin nucleus { | |
| 83 | R_nucleus=10 | |
| 84 | R_nucleusX=0 | |
| 85 | R_nucleusY=0 | |
| 86 | R_nucleusZ=0 | |
| 87 | } | |
| 88 | ||
| eb7d7e | 89 | */ |
| SP | 90 | #include "plugins.h" |
| 91 | #include <stdlib.h> | |
| 92 | #include <dlfcn.h> | |
| 93 | #include <string.h> | |
| 94 | #include "general.h" | |
| 95 | ||
| 96 | ts_plugin *init_plugin(ts_char *filename){ | |
| 97 | ts_plugin *plugin = (ts_plugin *)calloc(1, sizeof(ts_plugin)); | |
| 98 | plugin->filename=(ts_char *)calloc(strlen(filename),sizeof(ts_char)); | |
| 99 | strcpy(plugin->filename,filename); | |
| 100 | plugin->libhandle = dlopen(plugin->filename, RTLD_NOW); | |
| 101 | if(!plugin->libhandle){ | |
| 102 | ts_fprintf(stderr,"Error loading plugin: %s\n", filename); | |
| 103 | fatal("Exiting",235); | |
| 104 | } | |
| 105 | ts_plugin_details* (*get_plugin_details)(void) = dlsym(plugin->libhandle, "init"); | |
| 106 | plugin->details = get_plugin_details(); | |
| 107 | plugin->function = (ts_plugin_function *)calloc(1,sizeof(ts_plugin_function)); | |
| 108 | ||
| 109 | plugin->function->cleanup = dlsym(plugin->libhandle, "cleanup"); | |
| 110 | plugin->function->at_start = dlsym(plugin->libhandle, "at_start"); | |
| 111 | plugin->function->after_vesicle_init = dlsym(plugin->libhandle, "after_vesicle_init"); | |
| 112 | plugin->function->vm_hard_constraint = dlsym(plugin->libhandle, "vm_hard_constraint"); | |
| 113 | plugin->function->vm_energy_before = dlsym(plugin->libhandle, "vm_energy_before"); | |
| 114 | plugin->function->vm_energy_after = dlsym(plugin->libhandle, "vm_energy_after"); | |
| 115 | plugin->function->vm_new_state_rejected = dlsym(plugin->libhandle, "vm_new_state_rejected"); | |
| 116 | plugin->function->vm_new_state_accepted = dlsym(plugin->libhandle, "vm_new_state_accepted"); | |
| 117 | ||
| 118 | return plugin; | |
| 119 | } | |
| 120 | ||
| 121 | ||
| 122 | ts_plugin_list *init_plugin_list(ts_char **plugin_filenames, ts_uint number_of_plugins){ | |
| 123 | ts_plugin_list *plist=(ts_plugin_list *)calloc(1, sizeof(ts_plugin_list)); | |
| 124 | plist->plugin=(ts_plugin **)calloc(number_of_plugins, sizeof(ts_plugin *)); | |
| 125 | for(int i=0;i<number_of_plugins;i++){ | |
| 126 | plist->plugin[i]=init_plugin(plugin_filenames[i]); | |
| 127 | } | |
| 128 | return plist; | |
| 129 | } | |
| 130 | ||
| 131 | void free_plugin(ts_plugin *plugin){ | |
| 132 | plugin->function->cleanup(); | |
| 133 | free(plugin->function); | |
| 134 | free(plugin->details); | |
| 135 | free(plugin->filename); | |
| 136 | dlclose(plugin->libhandle); | |
| 137 | free(plugin); | |
| 138 | } | |
| 139 | ||
| 140 | void free_plugin_list(ts_plugin_list *plist){ | |
| 141 | for(int i=0;i<plist->n;i++){ | |
| 142 | free_plugin(plist->plugin[i]); | |
| 143 | } | |
| 144 | free(plist); | |
| 145 | } | |
