#ifndef _GENERAL_H #define _GENERAL_H #include /* @brief This is a header file, defining general constants and structures. * @file header.h * @author Samo Penic * @date 5.3.2001 * * Header file for general inclusion in all the code, defining data structures * and general constans. All datatypes used in the code is also defined here. * */ /* Defines */ /** @brief Return value of type bz_bool that indiceates successful function finish * * Function usualy return some value, which are the result of certain operation. Functions that don't * return any parameters can return value, that indicates if the function call finished successfully. * In case of successful function run, the functions should return TS_SUCCESS to the caller. This define * is set here to get uniformity among all the functions used in program. * * Example of usage: * ts_boot somefunction(ts_int param1, ....){ * ... * return TS_SUCCESS; * } */ #define TS_SUCCESS 0 /** @brief Return value of type bz_bool that indicates unsuccessful function finish * * Function usualy return some value, which are the result of certain operation. Functions that don't * return any parameters can return value, that indicates if the function call finished successfully. * In case of unsuccessful function run, the functions should return TS_FAIL to the caller. This define * is set here to get uniformity among all the functions used in program. * * Example of usage: * * ts_boot somefunction(ts_int param1, ....){ * ... * return TS_FAIL; * } */ #define TS_FAIL 1 /* CONSTANTS */ /* DATA TYPES */ /** @brief Sets the default datatype for ts_double * * Requred for some functions to work, like "pow" from math.h. If ts_double is defined as * float program must run with "powf". Where type dependant function is used it checks this * define directive to decide which version to compile in. Available options * * TS_DOUBLE_FLOAT * TS_DOUBLE_DOUBLE * TS_DOUBLE_LONGDOUBLE */ #define TS_DOUBLE_DOUBLE /** For the purpose of greater flexibility all data types used in the program * shouldn't use standard C types, but should use types defined here. * ts_int (uses int) */ typedef int ts_int; /** For the purpose of greater flexibility all data types used in the program * shouldn't use standard C types, but should use types defined here. * ts_uint (uses unsigned int) */ typedef unsigned int ts_uint; /** For the purpose of greater flexibility all data types used in the program * shouldn't use standard C types, but should use types defined here. * ts_long (uses long) */ typedef long ts_long; /** For the purpose of greater flexibility all data types used in the program * shouldn't use standard C types, but should use types defined here. * ts_ulong (uses unsigned long) */ typedef unsigned long ts_ulong; /** For the purpose of greater flexibility all data types used in the program * shouldn't use standard C types, but should use types defined here. * ts_float (uses float) */ typedef float ts_float; /** For the purpose of greater flexibility all data types used in the program * shouldn't use standard C types, but should use types defined here. * ts_double (uses double) */ typedef double ts_double; /** For the purpose of greater flexibility all data types used in the program * shouldn't use standard C types, but should use types defined here. * ts_char (uses char) */ typedef char ts_char; /** For the purpose of greater flexibility all data types used in the program * shouldn't use standard C types, but should use types defined here. * ts_uchar (uses unsigned char) */ typedef unsigned char ts_uchar; /** For the purpose of greater flexibility all data types used in the program * shouldn't use standard C types, but should use types defined here. * ts_bool (uses char) */ typedef char ts_bool; /* STRUCTURES */ /** @brief Data structure of all data connected to a vertex * * ts_vertex holds the data for one single point (bead, vertex) in the space. To understand how to use it * here is a detailed description of the fields in the data structure. */ struct ts_vertex { ts_uint idx; /**< Represents index of the vertex point. Should become obsolete in C. */ ts_double x; /**< The x coordinate of vertex. */ ts_double y; /**< The y coordinate of vertex. */ ts_double z; /**< The z coordinate of vertex. */ ts_uint neigh_no; /**< The number of neighbours. */ struct ts_vertex ***neigh; /**< The pointer that holds neigh_no pointers to this structure. Careful when using pointers to pointers! Also developers do mistakes here. */ ts_double *bond_length; ts_double *bond_length_dual; ts_double curvature; ts_double energy; ts_double energy_h; ts_uint tristar_no; struct ts_triangle ***tristar; struct ts_bond ***bond; struct ts_cell *cell; ts_double xk; ts_double c; ts_uint id; }; typedef struct ts_vertex ts_vertex; /** ts_bond is a structure that describes a bond */ typedef struct { ts_vertex *vtx1; ts_vertex *vtx2; ts_double bond_length; ts_double bond_length_dual; } ts_bond; struct ts_triangle { ts_uint idx; ts_vertex *vertex[3]; ts_uint neigh_no; struct ts_triangle **neigh; ts_double xnorm; ts_double ynorm; ts_double znorm; }; typedef struct ts_triangle ts_triangle; typedef struct ts_cell { ts_uint idx; ts_vertex **vertex; ts_uint nvertex; } ts_cell; typedef struct { ts_vertex **vlist; ts_bond **blist; ts_triangle **tlist; ts_cell **clist; ts_uint nshell; ts_uint nvertex; ts_uint nbond; ts_uint ntria; ts_cell ncell; ts_double dcell; ts_double shift; ts_double max_occupancy; ts_uint ncmax[3]; ts_double bending_rigidity; ts_double dmax; ts_double stepsize; ts_double cm[3]; } ts_vesicle; /* GLOBAL VARIABLES */ int quiet; /* FUNCTIONS */ /** Non-fatal error function handler: * @param text is a description of an error * @returns doesn't return anything */ void err(char *text); /** Fatal error function handler: * @param text is a description of an error * @param errcode is a (non-zero) error code * @returns terminates the execution of program with errcode set */ void fatal(char *text, ts_int errcode); //ts_uint ts_fprintf(FILE *fd, char *fmt, va_list ap); #endif