From 3006183b769f2e126b1a96e6bf697c2b7f657df7 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Sun, 26 Apr 2020 17:35:26 +0000
Subject: [PATCH] Code for incremental adding of inclusions done

---
 src/tape |   18 +++++++++---------
 1 files changed, 9 insertions(+), 9 deletions(-)

diff --git a/src/tape b/src/tape
index bdce9e7..1e96bcb 100644
--- a/src/tape
+++ b/src/tape
@@ -1,12 +1,12 @@
 ####### Vesicle definitions ###########
 # nshell is a number of divisions of dipyramid
-nshell=17
+nshell=10
 # dmax is the max. bond length (in units l_min)
 dmax=1.7
 # dmin_interspecies in the min. dist. between different vertex species (in units l_min)
 dmin_interspecies=1.2
 # bending rigidity of the membrane (in units kT)
-xk0=10.0
+xk0=20.0
 # max step size (in units l_min)
 stepsize=0.15
 
@@ -25,14 +25,14 @@
 
 
 #Stretching
-stretchswitch=1
+stretchswitch=0
 xkA0=1.0
 
 ####### Polymer (brush) definitions ###########
 # npoly is a number of polymers attached to npoly distinct vertices on vesicle
-npoly=10
+npoly=0
 # nmono is a number of monomers in each polymer
-nmono=20
+nmono=0
 # Spring constant between monomers of the polymer
 k_spring=800
 #set to 1 if half of the polymeres are inside the vesicle
@@ -61,7 +61,7 @@
 ####### Program Control ############
 #how many MC sweeps between subsequent records of states to disk
 #200000
-mcsweeps=200
+mcsweeps=2000
 #how many initial mcsweeps*inititer MC sweeps before recording to disk?
 #2
 inititer=0
@@ -92,18 +92,18 @@
 
 
 #number of vertices with spontaneous curvature (integer)
-number_of_vertices_with_c0=100
+number_of_vertices_with_c0=400
 #c0/2 is spontaneous curvature. c0 is used as (c1+c1-c0)^2 in energy term (float)
 c0=0.5
 #energy of attraction of vertices with spontaneous curvature (float, positive value for attraction)
 w=10.0
 #direct force on vesicles with spontaneous curvature (float)
-F=2.0
+F=0.0
 
 
 
 #plane confinement
-plane_confinement_switch=1
+plane_confinement_switch=0
 #final plane distance (float in lmin)
 plane_d=10
 #plane to vesicle repulsion force while closing

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