From 3006183b769f2e126b1a96e6bf697c2b7f657df7 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Sun, 26 Apr 2020 17:35:26 +0000
Subject: [PATCH] Code for incremental adding of inclusions done

---
 src/general.h |   15 ++++++++++++---
 1 files changed, 12 insertions(+), 3 deletions(-)

diff --git a/src/general.h b/src/general.h
index 7676000..2dd63d8 100644
--- a/src/general.h
+++ b/src/general.h
@@ -219,7 +219,7 @@
     ts_cell **cell;
     ts_double dcell;
     ts_double shift;
-    ts_double max_occupancy;
+    ts_uint max_occupancy;
 	ts_double dmin_interspecies;
 } ts_cell_list;
 
@@ -252,6 +252,11 @@
 typedef struct ts_poly_list ts_poly_list;
 
 
+typedef struct{
+	ts_float z_max;
+	ts_float z_min;
+	ts_int force_switch;
+} ts_confinement_plane;
 
 typedef struct {
 	long int nshell;
@@ -293,6 +298,9 @@
 	ts_double c0;
 	ts_double w;
 	ts_double F;
+	long int plane_confinement_switch;
+	ts_double plane_d;
+	ts_double plane_F;
 } ts_tape;
 
 
@@ -318,13 +326,14 @@
 	ts_double spring_constant;
 	ts_double pressure;
 	ts_int pswitch;
-    ts_tape *tape;
+ 	ts_tape *tape;
 	ts_double R_nucleus;
 	ts_double R_nucleusX;
 	ts_double R_nucleusY;
 	ts_double R_nucleusZ;
 	ts_double nucleus_center[3];
-    ts_double area;
+	ts_double area;
+	ts_confinement_plane confinement_plane;
 } ts_vesicle;
 
 

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