From fedf2b217113800a15f367e111e2dbcad4a3c92c Mon Sep 17 00:00:00 2001
From: Miha <mihaf@hapi.(none)>
Date: Thu, 06 Feb 2014 17:39:37 +0000
Subject: [PATCH] Polymers thermicaly move now! HArmonic potential added.

---
 src/tape |   16 +++++++++-------
 1 files changed, 9 insertions(+), 7 deletions(-)

diff --git a/src/tape b/src/tape
index e0d0dee..02c85b8 100644
--- a/src/tape
+++ b/src/tape
@@ -1,8 +1,8 @@
 ####### Vesicle definitions ###########
 # nshell is a number of divisions of dipyramid
 nshell=17
-# dmax is the square of the bond length 
-dmax=1.67
+# dmax is the max. bond length 
+dmax=1.7
 # bending rigidity of the membrane 
 xk0=25.0
 # max step size 
@@ -10,9 +10,11 @@
 
 ####### Polymer definitions ###########
 # npoly is a number of polymers attached to npoly distinct vertices on vesicle
-npoly=1000
-# nmono is a number of monomers in each polymere
+npoly=20
+# nmono is a number of monomers in each polymer
 nmono=15
+# Spring constant between monomers of the polymer
+k_spring=800
 
 #######  Cell definitions ############
 nxmax=60
@@ -22,11 +24,11 @@
 
 ####### Program Control ############
 #how many MC sweeps between subsequent records of states to disk
-mcsweeps=100
+mcsweeps=10
 #how many initial mcsweeps*inititer MC sweeps before recording to disk?
-inititer=100
+inititer=1
 #how many records do you want on the disk iteration are there in a run?
-iterations=1000
+iterations=100
 
 
 #shut up if we are using cluster!!!

--
Gitblit v1.9.3