From a8e354c7fad70eb7fdfda62ec83faf1be6c4ed44 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Tue, 24 Jan 2023 20:03:01 +0000
Subject: [PATCH] Changes in code and README for easier compilation. May break something
---
src/initial_distribution.c | 8 ++++++--
1 files changed, 6 insertions(+), 2 deletions(-)
diff --git a/src/initial_distribution.c b/src/initial_distribution.c
index 4956900..756fdae 100644
--- a/src/initial_distribution.c
+++ b/src/initial_distribution.c
@@ -43,6 +43,8 @@
vesicle=initial_distribution_dipyramid(tape->nshell,tape->ncxmax,tape->ncymax,tape->nczmax,tape->stepsize);
vesicle->tape=tape;
+ vesicle->clist->dmin_interspecies = tape->dmin_interspecies*tape->dmin_interspecies;
+ vesicle->poly_list=init_poly_list(tape->npoly,tape->nmono, vesicle->vlist, vesicle);
set_vesicle_values_from_tape(vesicle);
initial_population_with_c0(vesicle,tape);
return vesicle;
@@ -59,7 +61,7 @@
vesicle->clist->dmin_interspecies = tape->dmin_interspecies*tape->dmin_interspecies;
//Initialize grafted polymers (brush):
- vesicle->poly_list=init_poly_list(tape->npoly,tape->nmono, vesicle->vlist, vesicle);
+ //vesicle->poly_list=init_poly_list(tape->npoly,tape->nmono, vesicle->vlist, vesicle);
vesicle->spring_constant=tape->kspring;
poly_assign_spring_const(vesicle);
@@ -101,7 +103,8 @@
vesicle->clist->ncmax[0]=tape->ncxmax;
vesicle->clist->ncmax[1]=tape->ncymax;
vesicle->clist->ncmax[2]=tape->nczmax;
- vesicle->clist->max_occupancy=16; /* hard coded max occupancy? */
+//THIS IS NOW HARDCODED IN CELL.C
+// vesicle->clist->max_occupancy=16; /* hard coded max occupancy? */
vesicle->pressure= tape->pressure;
vesicle->pswitch=tape->pswitch;
@@ -134,6 +137,7 @@
continue;
}
vesicle->vlist->vtx[rndvtx]->c=tape->c0;
+ vesicle->vlist->vtx[rndvtx]->direct_interaction_force=tape->F;
}
mean_curvature_and_energy(vesicle);
if(fabs(tape->w)>1e-16){ //if nonzero energy
--
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