From fedf2b217113800a15f367e111e2dbcad4a3c92c Mon Sep 17 00:00:00 2001
From: Miha <mihaf@hapi.(none)>
Date: Thu, 06 Feb 2014 17:39:37 +0000
Subject: [PATCH] Polymers thermicaly move now! HArmonic potential added.

---
 src/tape |   20 ++++++++++++++++----
 1 files changed, 16 insertions(+), 4 deletions(-)

diff --git a/src/tape b/src/tape
index 38518d3..02c85b8 100644
--- a/src/tape
+++ b/src/tape
@@ -1,13 +1,20 @@
 ####### Vesicle definitions ###########
 # nshell is a number of divisions of dipyramid
 nshell=17
-# dmax is the square of the bond length 
-dmax=1.67
+# dmax is the max. bond length 
+dmax=1.7
 # bending rigidity of the membrane 
 xk0=25.0
 # max step size 
 stepsize=0.15
 
+####### Polymer definitions ###########
+# npoly is a number of polymers attached to npoly distinct vertices on vesicle
+npoly=20
+# nmono is a number of monomers in each polymer
+nmono=15
+# Spring constant between monomers of the polymer
+k_spring=800
 
 #######  Cell definitions ############
 nxmax=60
@@ -16,8 +23,13 @@
 
 
 ####### Program Control ############
-#how many iteration are there in a run?
-iterations=20000
+#how many MC sweeps between subsequent records of states to disk
+mcsweeps=10
+#how many initial mcsweeps*inititer MC sweeps before recording to disk?
+inititer=1
+#how many records do you want on the disk iteration are there in a run?
+iterations=100
+
 
 #shut up if we are using cluster!!!
 quiet=false

--
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