From fe24d29b3c8684f08dccd01f5785aa48b7137322 Mon Sep 17 00:00:00 2001
From: mihaf <miha.fosnaric@gmail.com>
Date: Tue, 25 Mar 2014 12:49:06 +0000
Subject: [PATCH] Added nucleus. Better initial configuration of filaments.

---
 src/main.c |   16 ++++++++++++++--
 1 files changed, 14 insertions(+), 2 deletions(-)

diff --git a/src/main.c b/src/main.c
index 54d868f..fa4b872 100644
--- a/src/main.c
+++ b/src/main.c
@@ -22,9 +22,10 @@
 	ts_vesicle *vesicle;
 	ts_tape *tape;
 	ts_uint start_iteration=0;
+	force_from_tape=0;
 	parse_args(argv,argc); // sets global variable command_line_args (defined in io.h)
 	ts_fprintf(stdout,"Starting program...\n\n");
-	if(force_from_tape){
+	if(command_line_args.force_from_tape){
 		ts_fprintf(stdout,"************************************************\n");
 		ts_fprintf(stdout,"**** Generating initial geometry from tape *****\n");
 		ts_fprintf(stdout,"************************************************\n\n");
@@ -37,8 +38,19 @@
 		ts_fprintf(stdout,"**********************************************************************\n\n");
 		tape=parsetape("tape");
 		vesicle=restore_state(&start_iteration);
+        if(vesicle==NULL){
+            ts_fprintf(stderr, "Dump file does not exist or is not a regular file! Did you mean to invoke trisurf with --force-from-tape option?\n\n");
+            return 1;
+        }
+		// nove vrednosti iz tapea...
+		vesicle->bending_rigidity=tape->xk0;
+		vtx_set_global_values(vesicle);
+		vesicle->pressure=tape->pressure;
+		vesicle->dmax=tape->dmax*tape->dmax;
+		poly_assign_filament_xi(vesicle,tape);
+		vesicle->clist->dmin_interspecies = tape->dmin_interspecies*tape->dmin_interspecies;
 
-		if(command_line_args.reset_iteration_count) start_iteration=tape->inititer+1;
+		if(command_line_args.reset_iteration_count) start_iteration=tape->inititer;
 		else start_iteration++;
 
 		if(start_iteration>=tape->iterations){

--
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