From ea1cce4c80ddb68c0b46a6873ef3b64cc4a958a1 Mon Sep 17 00:00:00 2001 From: mihaf <miha.fosnaric@gmail.com> Date: Mon, 24 Mar 2014 16:37:44 +0000 Subject: [PATCH] Added dmin_interspecies. --- src/tape | 12 +++++++----- 1 files changed, 7 insertions(+), 5 deletions(-) diff --git a/src/tape b/src/tape index 751b9e6..8d589d0 100644 --- a/src/tape +++ b/src/tape @@ -3,6 +3,8 @@ nshell=17 # dmax is the max. bond length (in units l_min) dmax=1.7 +# dmin_interspecies in the min. dist. between different vertex species (in units l_min) +dmin_interspecies=1 # bending rigidity of the membrane (in units kT) xk0=10.0 # max step size (in units l_min) @@ -10,9 +12,9 @@ # Pressure calculations # (pswitch=1: calc. p*dV energy contribution) -pswitch = 0 +pswitch = 1 # pressure difference: p_inside - p_outside (in units kT/l_min^3): -pressure=0.0 +pressure=-2.0 ####### Polymer (brush) definitions ########### # npoly is a number of polymers attached to npoly distinct vertices on vesicle @@ -28,7 +30,7 @@ # nfono is a number of monomers in each filament nfono=300 # Persistence lenght of the filaments (in units l_min) -xi=10 +xi=100 ####### Nucleus (inside the vesicle) ########### # Radius of an impenetrable hard sphere inside the vesicle @@ -42,11 +44,11 @@ ####### Program Control ############ #how many MC sweeps between subsequent records of states to disk -mcsweeps=300 +mcsweeps=100 #how many initial mcsweeps*inititer MC sweeps before recording to disk? inititer=0 #how many records do you want on the disk iteration are there in a run? -iterations=300 +iterations=20 #shut up if we are using cluster!!! -- Gitblit v1.9.3