From e984829db39b2778e4f66c34524329ad09749c45 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Mon, 11 Jul 2016 19:29:21 +0000
Subject: [PATCH] Added possibility of internal pegs. It can break the system however

---
 src/shcomplex.c |   33 ++++++++++++++++++---------------
 1 files changed, 18 insertions(+), 15 deletions(-)

diff --git a/src/shcomplex.c b/src/shcomplex.c
index 1c97600..bd3a733 100644
--- a/src/shcomplex.c
+++ b/src/shcomplex.c
@@ -1,3 +1,4 @@
+/* vim: set ts=4 sts=4 sw=4 noet : */
 #include<math.h>
 #include<stdlib.h>
 #include<gsl/gsl_complex.h>
@@ -68,7 +69,7 @@
     if(sph->co != NULL) free(sph->co);
     if(sph->ulm !=NULL) free(sph->ulm);
     if(sph->ulmComplex !=NULL) free(sph->ulmComplex);
-
+    if(sph->sumUlm2 !=NULL) free(sph->sumUlm2);
         if(sph->Ylmi!=NULL) {
             for(i=0;i<sph->l;i++){
                 if(sph->Ylmi[i]!=NULL){
@@ -130,30 +131,32 @@
 }
 
 
-ts_double calculateKc(ts_vesicle *vesicle){
-
-    ts_int i,j;
+ts_double calculateKc(ts_vesicle *vesicle, ts_int lmin, ts_int lmax){
+    ts_int min=lmin;
+    ts_int max=lmax; //vesicle->sphHarmonics->l-3;
+    ts_long i,j;
     ts_double retval, bval;
-    gsl_matrix *A=gsl_matrix_alloc(vesicle->sphHarmonics->l-1,2);
+    gsl_matrix *A=gsl_matrix_alloc(max-min,2);
     gsl_vector *tau=gsl_vector_alloc(2);
-    gsl_vector *b=gsl_vector_alloc(vesicle->sphHarmonics->l-1);
+    gsl_vector *b=gsl_vector_alloc(max-min);
     gsl_vector *x=gsl_vector_alloc(2);
-    gsl_vector *res=gsl_vector_alloc(vesicle->sphHarmonics->l-1);
+    gsl_vector *res=gsl_vector_alloc(max-min);
 
     //solving (A^T*A)*x=A^T*b
     //fill the data for matrix A and vector b
-    for(i=1;i<vesicle->sphHarmonics->l;i++){
-            gsl_matrix_set(A, i-1,0,(ts_double)((i-1)*(i+2)));
-            gsl_matrix_set(A, i-1,1,(ts_double)((i-1)*(i+2)*(i+1)*i));
-
-            bval=0;
+    for(i=min;i<max;i++){
+            gsl_matrix_set(A, i-min,0,(ts_double)((i-1)*(i+2)));
+            gsl_matrix_set(A, i-min,1,(ts_double)((i-1)*(i+2)*(i+1)*i));
+//            fprintf(stderr,"%e %e\n", gsl_matrix_get(A,i-min,0), gsl_matrix_get(A,i-min,1));
+            bval=0.0;
             //average for m from 0..l (only positive m's)
-            for(j=0;j<i;j++){
+            for(j=0;j<=i;j++){
                 bval+=vesicle->sphHarmonics->sumUlm2[i][(j+i)];
             }
-                bval=bval/(ts_double)vesicle->sphHarmonics->N/(ts_double)i;
+                bval=bval/(ts_double)vesicle->sphHarmonics->N/(ts_double)(i+1);
 
-            gsl_vector_set(b,i-1,1.0/bval);
+            gsl_vector_set(b,i-min,1.0/bval);
+//            fprintf(stderr,"%e\n", 1.0/gsl_vector_get(b,i-min));
     }
 //    fprintf(stderr,"b[2]=%e\n",gsl_vector_get(b,1));
     gsl_linalg_QR_decomp(A,tau);

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