From e984829db39b2778e4f66c34524329ad09749c45 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Mon, 11 Jul 2016 19:29:21 +0000
Subject: [PATCH] Added possibility of internal pegs. It can break the system however

---
 src/general.h |   22 ++++++++++++++++++++--
 1 files changed, 20 insertions(+), 2 deletions(-)

diff --git a/src/general.h b/src/general.h
index c768c0f..4eab674 100644
--- a/src/general.h
+++ b/src/general.h
@@ -1,3 +1,4 @@
+/* vim: set ts=4 sts=4 sw=4 noet : */
 #ifndef _GENERAL_H
 #define _GENERAL_H
 
@@ -256,11 +257,16 @@
 	long int nczmax;
 	long int npoly;
 	long int nmono;
+	long int internal_poly;
 	long int nfil;
 	long int nfono;
 	long int R_nucleus;
+	ts_double R_nucleusX;
+	ts_double R_nucleusY;
+	ts_double R_nucleusZ;
 	long int pswitch;
     long int constvolswitch;
+    long int constareaswitch;
     ts_double constvolprecision;
     	char *multiprocessing;
    	long int brezveze0;
@@ -305,7 +311,11 @@
 	ts_int pswitch;
     ts_tape *tape;
 	ts_double R_nucleus;
-
+	ts_double R_nucleusX;
+	ts_double R_nucleusY;
+	ts_double R_nucleusZ;
+	ts_double nucleus_center[3];
+    ts_double area;
 } ts_vesicle;
 
 
@@ -314,8 +324,9 @@
 
 int quiet;
 ts_double V0;
+ts_double A0;
 ts_double epsvol;
-
+ts_double epsarea;
 /* FUNCTIONS */
 
 /** Non-fatal error function handler:
@@ -336,4 +347,11 @@
 #define VTX(n) &(vlist->vtx[n])
 #define VTX_DATA(n) vlist->vtx[n].data
 
+
+/* FOR PID GENERATION ROUTINE */
+#define CPF_CLOEXEC 1
+
+int createPidFile(const char *progName, const char *pidFile, int flags);
+
+int lockRegion(int fd, int type, int whence, int start, int len);
 #endif

--
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