From e818ba5bcc461af545665c78157be4e52252aa1c Mon Sep 17 00:00:00 2001 From: Miha <miha.fosnaric@fe.uni-lj.si> Date: Mon, 11 Jul 2016 11:52:30 +0000 Subject: [PATCH] Merge branch 'master' of https://bitbucket.org/samop/trisurf-ng --- src/tape | 26 +++++++++++++++----------- 1 files changed, 15 insertions(+), 11 deletions(-) diff --git a/src/tape b/src/tape index a604c91..2e8b8c7 100644 --- a/src/tape +++ b/src/tape @@ -1,6 +1,6 @@ ####### Vesicle definitions ########### # nshell is a number of divisions of dipyramid -nshell=17 +nshell=5 # dmax is the max. bond length (in units l_min) dmax=1.7 # dmin_interspecies in the min. dist. between different vertex species (in units l_min) @@ -14,20 +14,20 @@ # (pswitch=1: calc. p*dV energy contribution) pswitch = 0 # pressure difference: p_inside - p_outside (in units kT/l_min^3): -pressure=0.0 +pressure=-10.0 #Constant volume constraint (0 disable constant volume, 1 enable wiht additional vertex move, 2 enable with epsvol) -constvolswitch=2 +constvolswitch=0 constvolprecision=1e-14 #Constant area constraint (0 disable constant area, 2 enable constant area with epsarea) -constareaswitch=2 +constareaswitch=0 ####### Polymer (brush) definitions ########### # npoly is a number of polymers attached to npoly distinct vertices on vesicle -npoly=10 +npoly=0 # nmono is a number of monomers in each polymer -nmono=10 +nmono=2 # Spring constant between monomers of the polymer k_spring=800 @@ -35,14 +35,16 @@ # nfil is a number of filaments inside the vesicle nfil=0 # nfono is a number of monomers in each filament -nfono=300 +nfono=3 # Persistence lenght of the filaments (in units l_min) -xi=0 +xi=100 ####### Nucleus (inside the vesicle) ########### # Radius of an impenetrable hard sphere inside the vesicle R_nucleus=0 - +R_nucleusX=0 +R_nucleusY=0 +R_nucleusZ=0 ####### Cell definitions ############ nxmax=60 nymax=60 @@ -52,10 +54,10 @@ ####### Program Control ############ #how many MC sweeps between subsequent records of states to disk #200000 -mcsweeps=20 +mcsweeps=200 #how many initial mcsweeps*inititer MC sweeps before recording to disk? #2 -inititer=0 +inititer=10 #how many records do you want on the disk iteration are there in a run? #10000 iterations=100 @@ -67,6 +69,8 @@ #shut up if we are using cluster!!! quiet=false + + #what type of multiprocessing? (*none, smp, cluster, distributed, cuda, auto) #currently only none makes sense. -- Gitblit v1.9.3