From e6efc61995516174081e923004477e3ff0853515 Mon Sep 17 00:00:00 2001 From: Samo Penic <samo.penic@gmail.com> Date: Tue, 19 Sep 2017 12:35:28 +0000 Subject: [PATCH] Added comments for spontaneous curvature in energy.c and tape --- src/tape | 13 ++++--------- 1 files changed, 4 insertions(+), 9 deletions(-) diff --git a/src/tape b/src/tape index 4cd382b..8f38645 100644 --- a/src/tape +++ b/src/tape @@ -1,10 +1,6 @@ ####### Vesicle definitions ########### # nshell is a number of divisions of dipyramid -<<<<<<< HEAD nshell=17 -======= -nshell=10 ->>>>>>> nirgov # dmax is the max. bond length (in units l_min) dmax=1.7 # dmin_interspecies in the min. dist. between different vertex species (in units l_min) @@ -29,9 +25,9 @@ ####### Polymer (brush) definitions ########### # npoly is a number of polymers attached to npoly distinct vertices on vesicle -npoly=800 +npoly=0 # nmono is a number of monomers in each polymer -nmono=6 +nmono=10 # Spring constant between monomers of the polymer k_spring=800 #set to 1 if half of the polymeres are inside the vesicle @@ -63,7 +59,7 @@ mcsweeps=2000 #how many initial mcsweeps*inititer MC sweeps before recording to disk? #2 -inititer=10 +inititer=1 #how many records do you want on the disk iteration are there in a run? #10000 iterations=100 @@ -90,10 +86,9 @@ #cuda options??? -#NirGov branch only! #number of vertices with spontaneous curvature (integer) number_of_vertices_with_c0=100 -#spontaneous curvature (float) +#c0/2 is spontaneous curvature. c0 is used as (c1+c1-c0)^2 in energy term (float) c0=0.5 #energy of attraction of vertices with spontaneous curvature (float, positive value for attraction) w=10.0 -- Gitblit v1.9.3