From e19e790e95f14ca69a7ce9c5e45d815fe21df36e Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Tue, 10 Jul 2012 12:33:43 +0000
Subject: [PATCH] It seems bondflip is fixed. Before 'for' loops I had to set j=0 in vertex.c and triangle.c in remove_neighbour

---
 src/Makefile.am |   14 ++++++++++----
 1 files changed, 10 insertions(+), 4 deletions(-)

diff --git a/src/Makefile.am b/src/Makefile.am
index 024f250..a6e0171 100644
--- a/src/Makefile.am
+++ b/src/Makefile.am
@@ -1,5 +1,11 @@
 trisurfdir=../
-trisurf_PROGRAMS=trisurf
-trisurf_SOURCES=general.c vertex.c bond.c triangle.c cell.c vesicle.c initial_distribution.c io.c main.c
-trisurf_LDFLAGS = -lm -lconfuse
-trisurf_CFLAGS = -Wall -Werror
+trisurf_PROGRAMS = trisurf
+trisurf_SOURCES = general.c vertex.c bond.c triangle.c cell.c vesicle.c initial_distribution.c io.c frame.c energy.c timestep.c vertexmove.c bondflip.c main.c
+#trisurf_LDFLAGS = -lm -lconfuse
+shdiscoverdir=../
+shdiscover_PROGRAMS= shdiscover
+shdiscover_SOURCES= general.c vertex.c bond.c triangle.c cell.c vesicle.c initial_distribution.c io.c energy.c sh.c shdiscover.c
+AM_CFLAGS = -Wall -Werror
+co_testdir=../
+co_test_PROGRAMS=co_test
+co_test_SOURCES= general.c vertex.c bond.c triangle.c cell.c vesicle.c initial_distribution.c io.c energy.c sh.c co_test.c

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