From 083e03adeaf985c9da1ed31d259ced9bb54c207c Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@fe.uni-lj.si>
Date: Thu, 06 Mar 2014 14:18:21 +0000
Subject: [PATCH] Started with arg parsing

---
 src/spherical_trisurf.c |   19 ++++++++++++++++---
 1 files changed, 16 insertions(+), 3 deletions(-)

diff --git a/src/spherical_trisurf.c b/src/spherical_trisurf.c
index 950ecf8..7fa40f9 100644
--- a/src/spherical_trisurf.c
+++ b/src/spherical_trisurf.c
@@ -25,6 +25,9 @@
 vesicle=initial_distribution_dipyramid(17,60,60,60,0.15);
 //parsetape(vesicle,&i);
 
+//similar to nmax in fortran code
+ts_uint nmax;
+
 //these four must come from parsetype!
 vesicle->dmax=1.67*1.67;
 vesicle->stepsize=0.15;
@@ -57,9 +60,19 @@
 calculateYlmi(vesicle);
 calculateUlm(vesicle);
 
+//preloop:
+for(i=0;i<1000;i++){
+	cell_occupation(vesicle);
+	for(j=0;j<1000;j++){
+		single_timestep(vesicle);
+	}	
+	centermass(vesicle);
+	fprintf(stderr, "Preloop %d completed.\n",i+1);
+}
 
-for(i=0;i<1;i++){
-	for(j=0;j<20;j++){
+nmax=1000;
+for(i=0;i<nmax;i++){
+	for(j=0;j<200;j++){
 		cell_occupation(vesicle);
 		for(k=0;k<5;k++){
 		single_timestep(vesicle);
@@ -77,7 +90,7 @@
     saveAvgUlm2(vesicle);
 
 	write_vertex_xml_file(vesicle,i);
-	fprintf(stderr, "Loop %d completed.\n",i+1);
+	fprintf(stderr, "Loop %d out of %d completed.\n",i+1,nmax);
 
 }
 

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