From 0f9d229fb830435d92cfc73c85aa7771a420286c Mon Sep 17 00:00:00 2001 From: mihaf <miha.fosnaric@gmail.com> Date: Tue, 13 May 2014 09:23:46 +0000 Subject: [PATCH] Just tape --- src/tape | 23 +++++++++++++++++------ 1 files changed, 17 insertions(+), 6 deletions(-) diff --git a/src/tape b/src/tape index ac316ef..023bc27 100644 --- a/src/tape +++ b/src/tape @@ -3,6 +3,8 @@ nshell=17 # dmax is the max. bond length (in units l_min) dmax=1.7 +# dmin_interspecies in the min. dist. between different vertex species (in units l_min) +dmin_interspecies=1.2 # bending rigidity of the membrane (in units kT) xk0=10.0 # max step size (in units l_min) @@ -14,6 +16,11 @@ # pressure difference: p_inside - p_outside (in units kT/l_min^3): pressure=0.0 +#Constant volume constraint (0 disable constant volume, 1 enable) +constvolswitch=0 +constvolprecision=1e-14 + + ####### Polymer (brush) definitions ########### # npoly is a number of polymers attached to npoly distinct vertices on vesicle npoly=0 @@ -24,14 +31,15 @@ ####### Filament (inside the vesicle) definitions ########### # nfil is a number of filaments inside the vesicle -nfil=1 +nfil=0 # nfono is a number of monomers in each filament nfono=300 -# Spring constant between monomers of the filament +# Persistence lenght of the filaments (in units l_min) +xi=0 ####### Nucleus (inside the vesicle) ########### # Radius of an impenetrable hard sphere inside the vesicle -R_nucleus=5 +R_nucleus=0 ####### Cell definitions ############ nxmax=60 @@ -41,13 +49,16 @@ ####### Program Control ############ #how many MC sweeps between subsequent records of states to disk -mcsweeps=300 +mcsweeps=2500 #how many initial mcsweeps*inititer MC sweeps before recording to disk? -inititer=0 +inititer=10 #how many records do you want on the disk iteration are there in a run? -iterations=300 +iterations=50010 +###### Spherical harmonics ########### +spherical_harmonics_coefficients=21 + #shut up if we are using cluster!!! quiet=false -- Gitblit v1.9.3