From 6bc95bfe19012a33f185adf1476e623d98d33465 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@fe.uni-lj.si>
Date: Tue, 16 Dec 2014 20:30:08 +0000
Subject: [PATCH] Added missing header file

---
 src/shcomplex.c |   44 +++++++++++++++++++++++++++++++++++++-------
 1 files changed, 37 insertions(+), 7 deletions(-)

diff --git a/src/shcomplex.c b/src/shcomplex.c
index 7afe27e..8df133c 100644
--- a/src/shcomplex.c
+++ b/src/shcomplex.c
@@ -9,8 +9,10 @@
 #include<gsl/gsl_linalg.h>
 #include "general.h"
 #include "sh.h"
+#include "shreal.h"
 #include "shcomplex.h"
-
+#include "string.h"
+#include "io.h"
 
 ts_spharm *complex_sph_init(ts_vertex_list *vlist, ts_uint l){
     ts_uint j,i;
@@ -51,13 +53,14 @@
 
     /* Calculate coefficients that will remain constant during all the simulation */ 
    precomputeShCoeff(sph);
-    
+   shreal_init(sph,l); //this is for TESTING only! 
     return sph;
 }
 
 ts_bool complex_sph_free(ts_spharm *sph){
     int i,j;
     if(sph==NULL) return TS_FAIL;
+    shreal_free(sph); //this is for TESTING only!
     for(i=0;i<sph->l;i++){
         if(sph->ulm[i]!=NULL) free(sph->ulm[i]);
         if(sph->ulmComplex[i]!=NULL) free(sph->ulmComplex[i]);
@@ -130,9 +133,9 @@
 }
 
 
-ts_double calculateKc(ts_vesicle *vesicle){
-    ts_int min=4;
-    ts_int max=vesicle->sphHarmonics->l-6;
+ts_double calculateKc(ts_vesicle *vesicle, ts_int lmin, ts_int lmax){
+    ts_int min=lmin;
+    ts_int max=lmax; //vesicle->sphHarmonics->l-3;
     ts_long i,j;
     ts_double retval, bval;
     gsl_matrix *A=gsl_matrix_alloc(max-min,2);
@@ -146,7 +149,7 @@
     for(i=min;i<max;i++){
             gsl_matrix_set(A, i-min,0,(ts_double)((i-1)*(i+2)));
             gsl_matrix_set(A, i-min,1,(ts_double)((i-1)*(i+2)*(i+1)*i));
-            fprintf(stderr,"%e %e\n", gsl_matrix_get(A,i-min,0), gsl_matrix_get(A,i-min,1));
+//            fprintf(stderr,"%e %e\n", gsl_matrix_get(A,i-min,0), gsl_matrix_get(A,i-min,1));
             bval=0.0;
             //average for m from 0..l (only positive m's)
             for(j=0;j<=i;j++){
@@ -155,7 +158,7 @@
                 bval=bval/(ts_double)vesicle->sphHarmonics->N/(ts_double)(i+1);
 
             gsl_vector_set(b,i-min,1.0/bval);
-            fprintf(stderr,"%e\n", 1.0/gsl_vector_get(b,i-min));
+//            fprintf(stderr,"%e\n", 1.0/gsl_vector_get(b,i-min));
     }
 //    fprintf(stderr,"b[2]=%e\n",gsl_vector_get(b,1));
     gsl_linalg_QR_decomp(A,tau);
@@ -170,3 +173,30 @@
     
     return retval;
 }
+
+
+ts_bool saveAvgUlm2Complex(ts_vesicle *vesicle){
+
+	FILE *fh;
+    char filename[10000];
+    strcpy(filename, command_line_args.path);
+    strcat(filename, "sph2out.dat");
+	fh=fopen(filename, "w");
+	if(fh==NULL){
+		err("Cannot open file %s for writing");
+		return TS_FAIL;
+	}
+
+	ts_spharm *sph=vesicle->sphHarmonics;
+	ts_int i,j;
+	fprintf(fh,"l,\tm,\tulm^2avg\n");
+	for(i=0;i<sph->l;i++){
+    		for(j=0;j<2*i+1;j++){
+		fprintf(fh,"%d,\t%d,\t%e\n", i, j-i, sph->sumUlm2[i][j]/(ts_double)sph->N);
+
+    		}
+    fprintf(fh,"\n");
+	}
+	fclose(fh);
+	return TS_SUCCESS;
+}

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