From bd826de2f539f2e48c8c01d2d7f9f34c7e97104a Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Fri, 13 May 2016 07:43:27 +0000
Subject: [PATCH] Fix in trisurf output, inhibiting print of successful reconstruction. Multiple fixes and improvements in python module. Added symlinking of tapes into the running directories and dumping tapes from snapshots into tape files.
---
src/cell.c | 18 +++++++++++-------
1 files changed, 11 insertions(+), 7 deletions(-)
diff --git a/src/cell.c b/src/cell.c
index 246866b..a1413eb 100644
--- a/src/cell.c
+++ b/src/cell.c
@@ -1,3 +1,4 @@
+/* vim: set ts=4 sts=4 sw=4 noet : */
#include<stdlib.h>
#include "general.h"
#include "vertex.h"
@@ -44,7 +45,6 @@
}
-//TODO: not debugged at all!
inline ts_uint vertex_self_avoidance(ts_vesicle *vesicle, ts_vertex *vtx){
ts_uint cellidx;
ts_uint ncx, ncy,ncz;
@@ -68,7 +68,6 @@
}
-//TODO: looks ok, but debug anyway in the future
inline ts_bool cell_add_vertex(ts_cell *cell, ts_vertex *vtx){
ts_uint i;
for(i=0;i<cell->nvertex;i++){
@@ -124,7 +123,7 @@
return TS_SUCCESS;
}
-// TODO: compiles ok, but it is completely untested and undebugged. It was debugged before rewrite, but this was long time ago.
+
ts_bool cell_occupation_number_and_internal_proximity(ts_cell_list *clist, ts_uint cellidx, ts_vertex *vtx){
ts_uint ncx,ncy,ncz,remainder,cell_occupation;
ts_uint i,j,k,l,neigh_cidx;
@@ -147,15 +146,20 @@
}
// Now we check whether we didn't come close to some other vertices in the same
// cell!
- if(cell_occupation>1){
+ if(cell_occupation>0){
for(l=0;l<cell_occupation;l++){
//carefull with this checks!
- if(clist->cell[neigh_cidx]->vertex[l]->idx!=vtx->idx){
+ if(clist->cell[neigh_cidx]->vertex[l]!=vtx){
// fprintf(stderr,"calling dist on vertex %i\n",l);
dist=vtx_distance_sq(clist->cell[neigh_cidx]->vertex[l],vtx);
- // fprintf(stderr,"dist was %f\n",dist);
- if(dist<=1.0) return TS_FAIL;
+
+// if(vtx->idx==1)
+// fprintf(stderr,"VTX(0) ima bliznji vertex z indeksom, %d, tipa %d \n", clist->cell[neigh_cidx]->vertex[l]->idx, clist->cell[neigh_cidx]->vertex[l]->id);
+// if(vtx->idx==0 && clist->cell[neigh_cidx]->vertex[l]->idx==0)
+// fprintf(stderr,"*** dist was %f\n",dist);
+
+ if(dist<=1.0 || (dist<=clist->dmin_interspecies && (clist->cell[neigh_cidx]->vertex[l]->id != vtx->id))) return TS_FAIL;
}
}
}
--
Gitblit v1.9.3