From b2fa8c6b55c420c079f285224f8d56ed03939767 Mon Sep 17 00:00:00 2001 From: Samo Penic <samo.penic@fe.uni-lj.si> Date: Tue, 29 Apr 2014 18:13:26 +0000 Subject: [PATCH] Bondflip doesnt segfaults anymore. Bondflip is disabled, debugging vertexmove --- src/tape | 20 +++++++++++++++----- 1 files changed, 15 insertions(+), 5 deletions(-) diff --git a/src/tape b/src/tape index 751b9e6..935bf18 100644 --- a/src/tape +++ b/src/tape @@ -3,6 +3,8 @@ nshell=17 # dmax is the max. bond length (in units l_min) dmax=1.7 +# dmin_interspecies in the min. dist. between different vertex species (in units l_min) +dmin_interspecies=1.2 # bending rigidity of the membrane (in units kT) xk0=10.0 # max step size (in units l_min) @@ -14,6 +16,11 @@ # pressure difference: p_inside - p_outside (in units kT/l_min^3): pressure=0.0 +#Constant volume constraint (0 disable constant volume, 1 enable) +constvolswitch=1 +constvolprecision=1e-3 + + ####### Polymer (brush) definitions ########### # npoly is a number of polymers attached to npoly distinct vertices on vesicle npoly=0 @@ -24,15 +31,15 @@ ####### Filament (inside the vesicle) definitions ########### # nfil is a number of filaments inside the vesicle -nfil=1 +nfil=0 # nfono is a number of monomers in each filament nfono=300 # Persistence lenght of the filaments (in units l_min) -xi=10 +xi=0 ####### Nucleus (inside the vesicle) ########### # Radius of an impenetrable hard sphere inside the vesicle -R_nucleus=5 +R_nucleus=0 ####### Cell definitions ############ nxmax=60 @@ -42,13 +49,16 @@ ####### Program Control ############ #how many MC sweeps between subsequent records of states to disk -mcsweeps=300 +mcsweeps=250 #how many initial mcsweeps*inititer MC sweeps before recording to disk? inititer=0 #how many records do you want on the disk iteration are there in a run? -iterations=300 +iterations=100 +###### Spherical harmonics ########### +spherical_harmonics_coefficients=21 + #shut up if we are using cluster!!! quiet=false -- Gitblit v1.9.3