From a549778bfece819cf0b599168c571e400e6eb67d Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@fe.uni-lj.si>
Date: Wed, 10 Sep 2014 07:03:15 +0000
Subject: [PATCH] Added calculation of epsV.
---
src/main.c | 17 +++++++++++++++++
1 files changed, 17 insertions(+), 0 deletions(-)
diff --git a/src/main.c b/src/main.c
index f300719..8a3a550 100644
--- a/src/main.c
+++ b/src/main.c
@@ -55,6 +55,9 @@
free(vesicle->tape);
vesicle->tape=tape;
vesicle->clist->dmin_interspecies = tape->dmin_interspecies*tape->dmin_interspecies;
+
+
+
/* spherical harmonics */
if(tape->shc>0){
vesicle->sphHarmonics=complex_sph_init(vesicle->vlist,tape->shc);
@@ -70,6 +73,20 @@
ts_fprintf(stdout, "Simulation already completed. if you want to rerun it try with --force-from-tape or --reset-iteration-count\n\n");
return 0;
}
+
+ /* if requested in tape, we can have smaller number of polymeres attached to membrane than the number of polymeres in dump file */
+ if(vesicle->tape->npoly != vesicle->poly_list->n){
+
+ ts_fprintf(stdout,"(INFO) the number of polymeres attached to membrane in tape is different than a number of polymeres in dump file!\n");
+ if(vesicle->tape->npoly > vesicle->poly_list->n){
+ ts_fprintf(stdout,"(INFO) It is possible to decrease the number of polymeres on the membrane, but it is not allowed to increase its number. The maximal allowed number in tape is %d The execution of program will terminate!\n",vesicle->poly_list->n);
+ fatal("Terminating due to increase of number of polymeres",1);
+ } else {
+ remove_random_polymeres(vesicle->poly_list, vesicle->poly_list->n - vesicle->tape->npoly);
+ ts_fprintf(stdout,"(INFO)\n(INFO) The new number of polymeres from tape is %d.\n\n",vesicle->poly_list->n);
+
+ }
+ }
}
run_simulation(vesicle, tape->mcsweeps, tape->inititer, tape->iterations, start_iteration);
--
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