From 8e345370c7846bb5592fb639a6ff91a8abbeef00 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Sun, 10 Jul 2016 18:44:43 +0000
Subject: [PATCH] Saving all the differences

---
 src/bondflip.c |  450 +++++++++++++++++++++++++++++++++----------------------
 1 files changed, 268 insertions(+), 182 deletions(-)

diff --git a/src/bondflip.c b/src/bondflip.c
index e56cc4e..858dc74 100644
--- a/src/bondflip.c
+++ b/src/bondflip.c
@@ -1,3 +1,4 @@
+/* vim: set ts=4 sts=4 sw=4 noet : */
 #include<stdlib.h>
 #include<math.h>
 #include "general.h"
@@ -8,8 +9,11 @@
 #include "energy.h"
 #include "timestep.h"
 #include "cell.h"
+#include "bondflip.h"
 //#include "io.h"
 #include<stdio.h>
+#include<string.h>
+#include "constvol.h"
 
 ts_bool single_bondflip_timestep(ts_vesicle *vesicle, ts_bond *bond, ts_double *rn){
 /*c  Vertex and triangle (lm and lp) indexing for bond flip:
@@ -28,10 +32,14 @@
     ts_vertex *k=bond->vtx2;
     ts_uint nei,neip,neim;
     ts_uint i,j;
-    ts_double oldenergy, delta_energy;
- //   ts_triangle *lm=NULL,*lp=NULL, *lp1=NULL, *lp2=NULL, *lm1=NULL, *lm2=NULL;
+    ts_double oldenergy, delta_energy, dvol=0.0, darea=0.0;
+    ts_triangle *lm=NULL,*lp=NULL, *lp1=NULL, *lm2=NULL;
 
     ts_vertex *kp,*km;
+
+    ts_double delta_energy_cv;
+    ts_vertex *constvol_vtx_moved, *constvol_vtx_backup;
+    ts_bool retval;
 
     if(it->neigh_no< 3) return TS_FAIL;
     if(k->neigh_no< 3) return TS_FAIL;
@@ -39,7 +47,7 @@
         fatal("In bondflip, number of neighbours of k or it is less than 3!",999);
     }
 
-
+    nei=0;
     for(i=0;i<it->neigh_no;i++){ // Finds the nn of it, that is k 
         if(it->neigh[i]==k){
             nei=i;
@@ -68,116 +76,11 @@
     }
  //   fprintf(stderr,"Membrane didn't wrap too much.. Continue.\n");
 /* if bond would be too long, return... */
-    if(vertex_distance_sq(km,kp) > vesicle->dmax ) return TS_FAIL;
+    if(vtx_distance_sq(km,kp) > vesicle->dmax ) return TS_FAIL;
  //   fprintf(stderr,"Bond will not be too long.. Continue.\n");
 
 /* we make a bond flip. this is different than in original fortran */
-// 0. step. Get memory prior the flip
-  oldenergy=0;
-  oldenergy+=k->xk* k->energy;
-  oldenergy+=kp->xk* kp->energy;
-  oldenergy+=km->xk* km->energy;
-  oldenergy+=it->xk* it->energy;
-//  for(i=0;i<k->neigh_no;i++) oldenergy+=k->neigh[i]->xk*k->neigh[i]->energy;
-//  for(i=0;i<kp->neigh_no;i++) oldenergy+=kp->neigh[i]->xk*kp->neigh[i]->energy;
-//  for(i=0;i<km->neigh_no;i++) oldenergy+=km->neigh[i]->xk*km->neigh[i]->energy;
-//  for(i=0;i<it->neigh_no;i++) oldenergy+=it->neigh[i]->xk*it->neigh[i]->energy;
-/*
-fprintf(stderr,"*** Naslov k=%d\n",k);
-fprintf(stderr,"*** Naslov it=%d\n",it);
-fprintf(stderr,"*** Naslov km=%d\n",km);
-fprintf(stderr,"*** Naslov kp=%d\n",kp);
-
-for(i=0;i<k->neigh_no;i++)
-    fprintf(stderr,"k sosed=%d\n",k->neigh[i]);
-for(i=0;i<it->neigh_no;i++)
-    fprintf(stderr,"it sosed=%d\n",it->neigh[i]);
-
-for(i=0;i<km->neigh_no;i++)
-    fprintf(stderr,"km sosed=%d\n",km->neigh[i]);
-for(i=0;i<kp->neigh_no;i++)
-    fprintf(stderr,"kp sosed=%d\n",kp->neigh[i]);
-
-
-*/
-  //  fprintf(stderr,"I WAS HERE! Before bondflip!\n");
-    ts_flip_bond(k,it,km,kp, bond);
-   // fprintf(stderr,"I WAS HERE! Bondflip successful!\n");
-
-/* Calculating the new energy */
-  delta_energy=0;
-  for(i=0;i<k->neigh_no;i++) energy_vertex(k->neigh[i]);
-  for(i=0;i<kp->neigh_no;i++) energy_vertex(kp->neigh[i]);
-  for(i=0;i<km->neigh_no;i++) energy_vertex(km->neigh[i]);
-  for(i=0;i<it->neigh_no;i++) energy_vertex(it->neigh[i]);
-  delta_energy+=k->xk* k->energy;
-  delta_energy+=kp->xk* kp->energy;
-  delta_energy+=km->xk* km->energy;
-  delta_energy+=it->xk* it->energy;
-//  for(i=0;i<k->neigh_no;i++) delta_energy+=k->neigh[i]->xk*k->neigh[i]->energy;
-//  for(i=0;i<kp->neigh_no;i++) delta_energy+=kp->neigh[i]->xk*kp->neigh[i]->energy;
-//  for(i=0;i<km->neigh_no;i++) delta_energy+=km->neigh[i]->xk*km->neigh[i]->energy;
-//  for(i=0;i<it->neigh_no;i++) delta_energy+=it->neigh[i]->xk*it->neigh[i]->energy;
-  delta_energy-=oldenergy;
- // fprintf(stderr,"I WAS HERE! Got energy!\n");
-/* MONTE CARLO */
-    if(delta_energy>=0){
-#ifdef TS_DOUBLE_DOUBLE
-        if(exp(-delta_energy)< drand48() )
-#endif
-#ifdef TS_DOUBLE_FLOAT
-        if(expf(-delta_energy)< (ts_float)drand48())
-#endif
-#ifdef TS_DOUBLE_LONGDOUBLE
-        if(expl(-delta_energy)< (ts_ldouble)drand48())
-#endif
-        {
-            //not accepted, reverting changes
-       //     fprintf(stderr,"Failed to move, due to MC\n");
-
-//            ts_flip_bond(km,kp,it,k, bond);
-            ts_flip_bond(kp,km,k,it, bond);
-                
-
-/*
-fprintf(stderr,"*** Naslov k=%d\n",k);
-fprintf(stderr,"*** Naslov it=%d\n",it);
-fprintf(stderr,"*** Naslov km=%d\n",km);
-fprintf(stderr,"*** Naslov kp=%d\n",kp);
-for(i=0;i<k->neigh_no;i++)
-    fprintf(stderr,"k sosed=%d\n",k->neigh[i]);
-for(i=0;i<it->neigh_no;i++)
-    fprintf(stderr,"it sosed=%d\n",it->neigh[i]);
-
-
-for(i=0;i<km->neigh_no;i++)
-    fprintf(stderr,"km sosed=%d\n",km->neigh[i]);
-for(i=0;i<kp->neigh_no;i++)
-    fprintf(stderr,"kp sosed=%d\n",kp->neigh[i]);
-*/
-
-
-
-        //    fprintf(stderr,"Reverted condition!\n");
-            return TS_FAIL;
-        }
-    }
-        //    fprintf(stderr,"Success\n");
-
-
-/* IF BONDFLIP ACCEPTED, THEN RETURN SUCCESS! */
-    return TS_SUCCESS;
-}
-
-
-ts_bool ts_flip_bond(ts_vertex *k,ts_vertex *it,ts_vertex *km, ts_vertex *kp,
-ts_bond *bond){
-
-    ts_triangle *lm=NULL,*lp=NULL, *lp1=NULL, *lm2=NULL;
-    ts_uint i,j, lmidx, lpidx;
-if(k==NULL || it==NULL || km==NULL || kp==NULL){
-    fatal("ts_flip_bond: You called me with invalid pointers to vertices",999);
-}
+// find lm, lp
 // 1. step. We find lm and lp from k->tristar !
     for(i=0;i<it->tristar_no;i++){
         for(j=0;j<k->tristar_no;j++){
@@ -215,59 +118,263 @@
             } 
         }
     }
-/*
-// DEBUG TESTING!
-fprintf(stderr,"*** Naslov k=%d\n",k);
-fprintf(stderr,"*** Naslov it=%d\n",it);
-fprintf(stderr,"*** Naslov km=%d\n",km);
-fprintf(stderr,"*** Naslov kp=%d\n",kp);
 
-for(i=0;i<k->neigh_no;i++)
-    fprintf(stderr,"k sosed=%d\n",k->neigh[i]);
-for(i=0;i<it->neigh_no;i++)
-    fprintf(stderr,"it sosed=%d\n",it->neigh[i]);
-
-
-// END DEBUG TESTING!
-*/
 if(lm2==NULL || lp1==NULL) fatal("ts_flip_bond: Cannot find triangles lm2 and lp1!",999);
 
 
-//fprintf(stderr,"1. step: lm, lm2, lp1 and lp found!\n");
+/* backup old structure */
+/* need to backup:
+ * vertices k, kp, km, it
+ * triangles lm, lp, lm2, lp1
+ * bond
+ */
+ts_vertex *bck_vtx[4];
+ts_triangle *bck_tria[4];
+ts_bond *bck_bond;
+ts_vertex *orig_vtx[]={k,it,kp,km};
+ts_triangle *orig_tria[]={lm,lp,lm2,lp1};
 
-/*
-//DEBUG TESTING
-fprintf(stderr,"--- Naslov lm=%d",lm);
-
-
-fprintf(stderr,"   vtxs(%d, %d, %d)\n",lm->vertex[0],lm->vertex[1], lm->vertex[2]);
-fprintf(stderr,"--- Naslov lp=%d",lp);
-fprintf(stderr,"   vtxs(%d, %d, %d)\n",lp->vertex[0],lp->vertex[1], lp->vertex[2]);
-fprintf(stderr,"--- Naslov lm2=%d",lm2);
-fprintf(stderr,"   vtxs(%d, %d, %d)\n",lm2->vertex[0],lm2->vertex[1], lm2->vertex[2]);
-fprintf(stderr,"--- Naslov lp1=%d",lp1);
-fprintf(stderr,"   vtxs(%d, %d, %d)\n",lp1->vertex[0],lp1->vertex[1], lp1->vertex[2]);
-
-for(i=0;i<lm->neigh_no;i++)
-    fprintf(stderr,"lm sosed=%d\n",lm->neigh[i]);
-for(i=0;i<lp->neigh_no;i++)
-    fprintf(stderr,"lp sosed=%d\n",lp->neigh[i]);
-// END DEBUG TESTING
+//fprintf(stderr,"Backuping!!!\n");
+	bck_bond=(ts_bond *)malloc(sizeof(ts_bond));
+for(i=0;i<4;i++){
+/*	fprintf(stderr,"vtx neigh[%d]=",i);
+	for(j=0;j<orig_vtx[i]->neigh_no;j++) fprintf(stderr," %d", orig_vtx[i]->neigh[j]->idx);
+	fprintf(stderr,"\n");
 */
-/*
-// DEBUG TESTING!
+	bck_vtx[i]=(ts_vertex *)malloc(sizeof(ts_vertex));
+	bck_tria[i]=(ts_triangle *)malloc(sizeof(ts_triangle));
+	memcpy((void *)bck_vtx[i],(void *)orig_vtx[i],sizeof(ts_vertex));
+	memcpy((void *)bck_tria[i],(void *)orig_tria[i],sizeof(ts_triangle));
+	/* level 2 pointers */
 
-for(i=0;i<3;i++){
+	bck_vtx[i]->neigh=(ts_vertex **)malloc(orig_vtx[i]->neigh_no*sizeof(ts_vertex *));
+	bck_vtx[i]->tristar=(ts_triangle **)malloc(orig_vtx[i]->tristar_no*sizeof(ts_triangle *));
+	bck_vtx[i]->bond=(ts_bond **)malloc(orig_vtx[i]->bond_no*sizeof(ts_bond *));
+	bck_tria[i]->neigh=(ts_triangle **)malloc(orig_tria[i]->neigh_no*sizeof(ts_triangle *));
 
-    if(lp1->neigh[i]==lp) fprintf(stderr,"Nasel sem par lp1->lp\n");
-    if(lp->neigh[i]==lp1) fprintf(stderr,"Nasel sem par lp->lp1\n");
-    if(lm2->neigh[i]==lm) fprintf(stderr,"Nasel sem par lm2->lm\n");
-    if(lm->neigh[i]==lm2) fprintf(stderr,"Nasel sem par lm->lm2\n");
+	memcpy((void *)bck_vtx[i]->neigh,(void *)orig_vtx[i]->neigh,orig_vtx[i]->neigh_no*sizeof(ts_vertex *));
+	memcpy((void *)bck_vtx[i]->tristar,(void *)orig_vtx[i]->tristar,orig_vtx[i]->tristar_no*sizeof(ts_triangle *));
+	memcpy((void *)bck_vtx[i]->bond,(void *)orig_vtx[i]->bond,orig_vtx[i]->bond_no*sizeof(ts_bond *));
+	
+	memcpy((void *)bck_tria[i]->neigh,(void *)orig_tria[i]->neigh,orig_tria[i]->neigh_no*sizeof(ts_triangle *));	
 }
-// END DEBUG TESTING!
+	memcpy(bck_bond,bond,sizeof(ts_bond));
+//fprintf(stderr,"Backup complete!!!\n");
+/* end backup vertex */
+
+/* Save old energy */
+  oldenergy=0;
+  oldenergy+=k->xk* k->energy;
+  oldenergy+=kp->xk* kp->energy;
+  oldenergy+=km->xk* km->energy;
+  oldenergy+=it->xk* it->energy;
+  //Neigbours of k, it, km, kp don't change its energy.
+
+	if(vesicle->pswitch == 1 || vesicle->tape->constvolswitch>0){dvol = -lm->volume - lp->volume;}
+    if(vesicle->tape->constareaswitch==2){darea=-lm->area-lp->area;} 
+/*    vesicle_volume(vesicle);
+    fprintf(stderr,"Volume in the beginning=%1.16e\n", vesicle->volume);
 */
 
+/* fix data structure for flipped bond */
+    ts_flip_bond(k,it,km,kp, bond,lm, lp, lm2, lp1);
 
+
+/* Calculating the new energy */
+  delta_energy=0;
+  delta_energy+=k->xk* k->energy;
+  delta_energy+=kp->xk* kp->energy;
+  delta_energy+=km->xk* km->energy;
+  delta_energy+=it->xk* it->energy;
+  //Neigbours of k, it, km, kp don't change its energy.
+
+    delta_energy-=oldenergy;
+	if(vesicle->pswitch == 1 || vesicle->tape->constvolswitch>0){
+		dvol = dvol + lm->volume + lp->volume;
+		if(vesicle->pswitch==1) delta_energy-= vesicle->pressure*dvol;
+	}
+    if(vesicle->tape->constareaswitch==2){
+        darea=darea+lm->area+lp->area; 
+/*check whether the dvol is gt than epsvol */
+		if(fabs(vesicle->area+darea-A0)>epsarea){
+			//restore old state.
+			/* restoration procedure copied from few lines below */
+			    for(i=0;i<4;i++){
+			//			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
+				free(orig_vtx[i]->neigh);
+				free(orig_vtx[i]->tristar);
+				free(orig_vtx[i]->bond);
+				free(orig_tria[i]->neigh);
+				memcpy((void *)orig_vtx[i],(void *)bck_vtx[i],sizeof(ts_vertex));
+				memcpy((void *)orig_tria[i],(void *)bck_tria[i],sizeof(ts_triangle));
+			//			fprintf(stderr,"Restored vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
+				/* level 2 pointers are redirected*/
+			    }
+			    memcpy(bond,bck_bond,sizeof(ts_bond));
+			    for(i=0;i<4;i++){
+				free(bck_vtx[i]);
+				free(bck_tria[i]);
+			/*			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d =",i, orig_vtx[i]->neigh_no );
+				for(j=0;j<orig_vtx[i]->neigh_no;j++) fprintf(stderr," %d", orig_vtx[i]->neigh[j]->idx);
+				fprintf(stderr,"\n"); */
+			    }
+			    free(bck_bond);
+			    return TS_FAIL;
+
+		}
+    }
+
+
+
+
+	if(vesicle->tape->constvolswitch == 2){
+		/*check whether the dvol is gt than epsvol */
+		if(fabs(vesicle->volume+dvol-V0)>epsvol){
+			//restore old state.
+			/* restoration procedure copied from few lines below */
+			    for(i=0;i<4;i++){
+			//			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
+				free(orig_vtx[i]->neigh);
+				free(orig_vtx[i]->tristar);
+				free(orig_vtx[i]->bond);
+				free(orig_tria[i]->neigh);
+				memcpy((void *)orig_vtx[i],(void *)bck_vtx[i],sizeof(ts_vertex));
+				memcpy((void *)orig_tria[i],(void *)bck_tria[i],sizeof(ts_triangle));
+			//			fprintf(stderr,"Restored vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
+				/* level 2 pointers are redirected*/
+			    }
+			    memcpy(bond,bck_bond,sizeof(ts_bond));
+			    for(i=0;i<4;i++){
+				free(bck_vtx[i]);
+				free(bck_tria[i]);
+			/*			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d =",i, orig_vtx[i]->neigh_no );
+				for(j=0;j<orig_vtx[i]->neigh_no;j++) fprintf(stderr," %d", orig_vtx[i]->neigh[j]->idx);
+				fprintf(stderr,"\n"); */
+			    }
+			    free(bck_bond);
+			    return TS_FAIL;
+
+		}
+
+	} else
+    if(vesicle->tape->constvolswitch == 1){
+        retval=constvolume(vesicle, it, -dvol, &delta_energy_cv, &constvol_vtx_moved,&constvol_vtx_backup);
+        if(retval==TS_FAIL){
+/* restoration procedure copied from few lines below */
+            for(i=0;i<4;i++){
+    //			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
+                free(orig_vtx[i]->neigh);
+                free(orig_vtx[i]->tristar);
+                free(orig_vtx[i]->bond);
+                free(orig_tria[i]->neigh);
+                memcpy((void *)orig_vtx[i],(void *)bck_vtx[i],sizeof(ts_vertex));
+                memcpy((void *)orig_tria[i],(void *)bck_tria[i],sizeof(ts_triangle));
+    //			fprintf(stderr,"Restored vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
+                /* level 2 pointers are redirected*/
+            }
+            memcpy(bond,bck_bond,sizeof(ts_bond));
+            for(i=0;i<4;i++){
+                free(bck_vtx[i]);
+                free(bck_tria[i]);
+    /*			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d =",i, orig_vtx[i]->neigh_no );
+                for(j=0;j<orig_vtx[i]->neigh_no;j++) fprintf(stderr," %d", orig_vtx[i]->neigh[j]->idx);
+                fprintf(stderr,"\n"); */
+            }
+            free(bck_bond);
+            return TS_FAIL;
+        }
+        delta_energy+=delta_energy_cv;
+    }
+
+
+/* MONTE CARLO */
+    if(delta_energy>=0){
+#ifdef TS_DOUBLE_DOUBLE
+        if(exp(-delta_energy)< drand48())
+#endif
+#ifdef TS_DOUBLE_FLOAT
+        if(expf(-delta_energy)< (ts_float)drand48())
+#endif
+#ifdef TS_DOUBLE_LONGDOUBLE
+        if(expl(-delta_energy)< (ts_ldouble)drand48())
+#endif
+        {
+            //not accepted, reverting changes
+	    //restore all backups
+//		fprintf(stderr,"Restoring!!!\n");
+        if(vesicle->tape->constvolswitch == 1){
+            constvolumerestore(constvol_vtx_moved,constvol_vtx_backup);
+        }
+
+		for(i=0;i<4;i++){
+//			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
+			free(orig_vtx[i]->neigh);
+			free(orig_vtx[i]->tristar);
+			free(orig_vtx[i]->bond);
+			free(orig_tria[i]->neigh);
+			memcpy((void *)orig_vtx[i],(void *)bck_vtx[i],sizeof(ts_vertex));
+			memcpy((void *)orig_tria[i],(void *)bck_tria[i],sizeof(ts_triangle));
+//			fprintf(stderr,"Restored vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
+			/* level 2 pointers are redirected*/
+		}
+		memcpy(bond,bck_bond,sizeof(ts_bond));
+
+		for(i=0;i<4;i++){
+			free(bck_vtx[i]);
+			free(bck_tria[i]);
+/*			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d =",i, orig_vtx[i]->neigh_no );
+			for(j=0;j<orig_vtx[i]->neigh_no;j++) fprintf(stderr," %d", orig_vtx[i]->neigh[j]->idx);
+			fprintf(stderr,"\n"); */
+		}
+
+		free(bck_bond);
+
+//		fprintf(stderr,"Restoration complete!!!\n");
+//    vesicle_volume(vesicle);
+//    fprintf(stderr,"Volume after fail=%1.16e\n", vesicle->volume);
+
+		return TS_FAIL;
+        }
+    }
+     /* IF BONDFLIP ACCEPTED, THEN RETURN SUCCESS! */
+//            fprintf(stderr,"SUCCESS!!!\n");
+
+    if(vesicle->tape->constvolswitch == 2){
+	    vesicle->volume+=dvol;
+    } else if(vesicle->tape->constvolswitch == 1){
+        constvolumeaccept(vesicle,constvol_vtx_moved,constvol_vtx_backup);
+    }
+    if(vesicle->tape->constareaswitch==2){
+        vesicle->area+=darea;
+    }
+	// delete all backups
+	for(i=0;i<4;i++){
+	free(bck_vtx[i]->neigh);
+	free(bck_vtx[i]->bond);
+	free(bck_vtx[i]->tristar);
+	free(bck_vtx[i]);
+ 	free(bck_tria[i]->neigh);
+        free(bck_tria[i]);
+/*	fprintf(stderr,"Afret backup deletion vtx neigh[%d]=",i);
+	for(j=0;j<orig_vtx[i]->neigh_no;j++) fprintf(stderr," %d", orig_vtx[i]->neigh[j]->idx);
+	fprintf(stderr,"\n");
+*/	
+	}
+	free(bck_bond);
+
+//    vesicle_volume(vesicle);
+//    fprintf(stderr,"Volume after success=%1.16e\n", vesicle->volume);
+    return TS_SUCCESS;
+}
+
+
+ts_bool ts_flip_bond(ts_vertex *k,ts_vertex *it,ts_vertex *km, ts_vertex *kp,
+ts_bond *bond, ts_triangle *lm, ts_triangle *lp, ts_triangle *lm2, ts_triangle *lp1){
+
+    ts_uint i; //lmidx, lpidx;
+if(k==NULL || it==NULL || km==NULL || kp==NULL){
+    fatal("ts_flip_bond: You called me with invalid pointers to vertices",999);
+}
 // 2. step. We change the triangle vertices... (actual bond flip)
     for(i=0;i<3;i++) if(lm->vertex[i]== it) lm->vertex[i]= kp;
     for(i=0;i<3;i++) if(lp->vertex[i]== k) lp->vertex[i]= km;
@@ -276,14 +383,17 @@
 //   * normals are recalculated here
     triangle_normal_vector(lp);
     triangle_normal_vector(lm);
+//fprintf(stderr,"2a. step: triangle normals recalculated\n");
 // 3. step. Correct neighbours in vertex_list
 
 
-            vertex_remove_neighbour(k,it);
-            vertex_remove_neighbour(it,k);
+            vtx_remove_neighbour(k,it);
+//            vtx_remove_neighbour(it,k);
+//fprintf(stderr,"3. step (PROGRESS): removed k and it neighbours\n");
+    
             //Tukaj pa nastopi tezava... Kam dodati soseda?
-            vertex_insert_neighbour(km,kp,k);
-            vertex_insert_neighbour(kp,km,it);
+            vtx_insert_neighbour(km,kp,k);
+            vtx_insert_neighbour(kp,km,it);
 //            vertex_add_neighbour(km,kp); //pazi na vrstni red.
 //            vertex_add_neighbour(kp,km);
 //fprintf(stderr,"3. step: vertex neighbours corrected\n");
@@ -300,7 +410,7 @@
 // 5. step. Correct neighbouring triangles 
    
     triangle_remove_neighbour(lp,lp1);
-   // fprintf(stderr,".\n");
+  //  fprintf(stderr,".\n");
     triangle_remove_neighbour(lp1,lp);
   //  fprintf(stderr,".\n");
     triangle_remove_neighbour(lm,lm2);
@@ -318,37 +428,13 @@
 // 6. step. Correct tristar for vertices km, kp, k and it
             vertex_add_tristar(km,lp);  // Preveri vrstni red!
             vertex_add_tristar(kp,lm);
-            vertex_remove_tristar(it,lm);
-            vertex_remove_tristar(k,lp);
+            vtx_remove_tristar(it,lm);
+            vtx_remove_tristar(k,lp);
 //fprintf(stderr,"6. step: tristar corrected\n");
-
-/*
-//DEBUG TESTING
-fprintf(stderr,"--- Naslov lm=%d",lm);
-
-
-fprintf(stderr,"   vtxs(%d, %d, %d)\n",lm->vertex[0],lm->vertex[1], lm->vertex[2]);
-fprintf(stderr,"--- Naslov lp=%d",lp);
-fprintf(stderr,"   vtxs(%d, %d, %d)\n",lp->vertex[0],lp->vertex[1], lp->vertex[2]);
-fprintf(stderr,"--- Naslov lm2=%d",lm2);
-fprintf(stderr,"   vtxs(%d, %d, %d)\n",lm2->vertex[0],lm2->vertex[1], lm2->vertex[2]);
-fprintf(stderr,"--- Naslov lp1=%d",lp1);
-fprintf(stderr,"   vtxs(%d, %d, %d)\n",lp1->vertex[0],lp1->vertex[1], lp1->vertex[2]);
-
-for(i=0;i<lm->neigh_no;i++)
-    fprintf(stderr,"lm sosed=%d\n",lm->neigh[i]);
-for(i=0;i<lp->neigh_no;i++)
-    fprintf(stderr,"lp sosed=%d\n",lp->neigh[i]);
-// END DEBUG TESTING
-*/
   energy_vertex(k);
   energy_vertex(kp);
   energy_vertex(km);
   energy_vertex(it);
-
-
 // END modifications to data structure!
-
-
     return TS_SUCCESS;
 }

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