From 82a8abcddd62838bfcd06b6081042caf4d385a88 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Wed, 13 Jul 2016 21:37:13 +0000
Subject: [PATCH] Seems that the bugs are fixed. Pegs are self avoidant now

---
 src/spherical_trisurf.c |   29 ++++-------------------------
 1 files changed, 4 insertions(+), 25 deletions(-)

diff --git a/src/spherical_trisurf.c b/src/spherical_trisurf.c
index 7fa40f9..06a84f4 100644
--- a/src/spherical_trisurf.c
+++ b/src/spherical_trisurf.c
@@ -1,3 +1,4 @@
+/* vim: set ts=4 sts=4 sw=4 noet : */
 #include<stdio.h>
 #include<math.h>
 #include "general.h"
@@ -61,10 +62,11 @@
 calculateUlm(vesicle);
 
 //preloop:
+ts_double vmsr, bfsr;
 for(i=0;i<1000;i++){
 	cell_occupation(vesicle);
 	for(j=0;j<1000;j++){
-		single_timestep(vesicle);
+		single_timestep(vesicle, &vmsr, &bfsr);
 	}	
 	centermass(vesicle);
 	fprintf(stderr, "Preloop %d completed.\n",i+1);
@@ -75,7 +77,7 @@
 	for(j=0;j<200;j++){
 		cell_occupation(vesicle);
 		for(k=0;k<5;k++){
-		single_timestep(vesicle);
+		single_timestep(vesicle, &vmsr, &bfsr);
 		}
 		centermass(vesicle);
 	}	
@@ -103,26 +105,3 @@
 
 
 
-ts_bool saveAvgUlm2(ts_vesicle *vesicle){
-
-	FILE *fh;
-	
-	fh=fopen("sph2out.dat", "w");
-	if(fh==NULL){
-		err("Cannot open file %s for writing");
-		return TS_FAIL;
-	}
-
-	ts_spharm *sph=vesicle->sphHarmonics;
-	ts_int i,j;
-	fprintf(fh,"l,\tm,\tulm^2avg\n");
-	for(i=0;i<sph->l;i++){
-    		for(j=0;j<2*i+1;j++){
-		fprintf(fh,"%d,\t%d,\t%e\n", i, j-i, sph->sumUlm2[i][j]/(ts_double)sph->N);
-
-    		}
-    fprintf(fh,"\n");
-	}
-	fclose(fh);
-	return TS_SUCCESS;
-}

--
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