From 819a098258db5b53d126720394644c909f5656a7 Mon Sep 17 00:00:00 2001
From: samo <samo.penic@gmail.com>
Date: Wed, 26 Apr 2017 12:53:15 +0000
Subject: [PATCH] Fixes for compilation on Ubuntu 17.04

---
 src/timestep.c |   20 +++++++-------------
 1 files changed, 7 insertions(+), 13 deletions(-)

diff --git a/src/timestep.c b/src/timestep.c
index 6972015..27400e7 100644
--- a/src/timestep.c
+++ b/src/timestep.c
@@ -49,22 +49,16 @@
 		fd2=fopen(filename,"w");
 	else
 		fd2=fopen(filename,"a");
-		if(fd2==NULL){
-			fatal("Cannot open ulm2.csv file for writing",1);
-		}
-		if(start_iteration==0) //file does not exist
-			fprintf(fd2, "Timestep u_00^2 u_10^2 u_11^2 u_20^2 ...\n");	
-
+	if(fd2==NULL){
+		fatal("Cannot open ulm2.csv file for writing",1);
+	}
+	if(start_iteration==0) //file does not exist
+		fprintf(fd2, "Timestep u_00^2 u_10^2 u_11^2 u_20^2 ...\n");	
 	}
 
 /* RANDOM SEED SET BY CURRENT TIME */
 	epochtime=get_epoch();			
 	srand48(epochtime);
-/*Nir Gov: randomly add spontaneous curvature for some vertices */
-	for(i=0;i<200;i++){
-		int b=rand() % vesicle->vlist->n;
-		vesicle->vlist->vtx[b]->c=-0.1;
-	}
 	centermass(vesicle);
 	cell_occupation(vesicle);
 	vesicle_volume(vesicle); //needed for constant volume at this moment
@@ -74,7 +68,7 @@
 	ts_fprintf(stdout,"Setting volume V0=%.17f\n",V0);
 	if(A0<0.000001)
 		A0=vesicle->area;
-		ts_fprintf(stdout,"Setting area A0=%.17f\n",A0);
+	ts_fprintf(stdout,"Setting area A0=%.17f\n",A0);
 	epsvol=4.0*sqrt(2.0*M_PI)/pow(3.0,3.0/4.0)*V0/pow(vesicle->tlist->n,3.0/2.0);
     epsarea=A0/(ts_double)vesicle->tlist->n;
   //  fprintf(stderr, "DVol=%1.16f (%1.16f), V0=%1.16f\n", epsvol,0.003e-2*V0,V0);
@@ -98,7 +92,7 @@
 		cell_occupation(vesicle);
             dump_state(vesicle,i);
 		if(i>=inititer){
-			write_vertex_xml_file(vesicle,i-inititer);
+			write_vertex_xml_file(vesicle,i-inititer,NULL);
 			write_master_xml_file(command_line_args.output_fullfilename);
 			epochtime=get_epoch();			
 			gyration_eigen(vesicle, &l1, &l2, &l3);

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