From 759169c7cead24a05533f78058c5a7ebdda319c5 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Sun, 03 Jul 2016 22:17:37 +0000
Subject: [PATCH] Tried to made all functionality for clustering. Not debugged and will probably fail miserably

---
 src/tape |   29 +++++++++++++++++++++--------
 1 files changed, 21 insertions(+), 8 deletions(-)

diff --git a/src/tape b/src/tape
index 833acaa..59cc09c 100644
--- a/src/tape
+++ b/src/tape
@@ -12,13 +12,20 @@
 
 # Pressure calculations
 # (pswitch=1: calc. p*dV energy contribution)
-pswitch = 1
+pswitch = 0
 # pressure difference: p_inside - p_outside (in units kT/l_min^3):
-pressure=-1.0
+pressure=-10.0
+
+#Constant volume constraint (0 disable constant volume, 1 enable wiht additional vertex move, 2 enable with epsvol)
+constvolswitch=0
+constvolprecision=1e-14
+
+#Constant area constraint (0 disable constant area, 2 enable constant area with epsarea)
+constareaswitch=2
 
 ####### Polymer (brush) definitions ###########
 # npoly is a number of polymers attached to npoly distinct vertices on vesicle
-npoly=0
+npoly=3
 # nmono is a number of monomers in each polymer
 nmono=10
 # Spring constant between monomers of the polymer
@@ -30,12 +37,14 @@
 # nfono is a number of monomers in each filament
 nfono=300
 # Persistence lenght of the filaments (in units l_min)
-xi=5000
+xi=0
 
 ####### Nucleus (inside the vesicle) ###########
 # Radius of an impenetrable hard sphere inside the vesicle
-R_nucleus=5
-
+R_nucleus=0
+R_nucleusX=6.0
+R_nucleusY=12.0
+R_nucleusZ=6.0
 #######  Cell definitions ############
 nxmax=60
 nymax=60
@@ -44,14 +53,18 @@
 
 ####### Program Control ############
 #how many MC sweeps between subsequent records of states to disk
-mcsweeps=10
+#200000
+mcsweeps=200
 #how many initial mcsweeps*inititer MC sweeps before recording to disk?
+#2
 inititer=0
 #how many records do you want on the disk iteration are there in a run?
-iterations=2000
+#10000
+iterations=100
 
 
 ###### Spherical harmonics ###########
+# If 0 then spherical harmonics are not calculated at all.
 spherical_harmonics_coefficients=21
 
 #shut up if we are using cluster!!!

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