From 737e1c8236e7e9b72cf08c5d173e0a307c38600c Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Tue, 10 Jul 2012 12:34:47 +0000
Subject: [PATCH] Merge branch 'bondflip'

---
 src/spherical_trisurf.c |   20 +++++++++++---------
 1 files changed, 11 insertions(+), 9 deletions(-)

diff --git a/src/spherical_trisurf.c b/src/spherical_trisurf.c
index f81e45d..feba26a 100644
--- a/src/spherical_trisurf.c
+++ b/src/spherical_trisurf.c
@@ -32,6 +32,7 @@
 vesicle->bending_rigidity=25.0;
 //fprintf(stderr,"xk=%f",vesicle->bending_rigidity);
 
+	centermass(vesicle);
 vesicle->sphHarmonics=sph_init(vesicle->vlist, 21);
 
 vesicle_volume(vesicle);
@@ -43,21 +44,21 @@
 
 
 
-for(i=0;i<10;i++){
-	centermass(vesicle);
+for(i=0;i<10000;i++){
 	cell_occupation(vesicle);
 	for(j=0;j<1000;j++){
 		single_timestep(vesicle);
 	}	
-vesicle_volume(vesicle);
-r0=getR0(vesicle);
+	centermass(vesicle);
+    vesicle_volume(vesicle);
+    r0=getR0(vesicle);
 
-preparationSh(vesicle,r0);
-calculateYlmi(vesicle);
-calculateUlm(vesicle);
+    preparationSh(vesicle,r0);
+    calculateYlmi(vesicle);
+    calculateUlm(vesicle);
 
-storeUlm2(vesicle);
-saveAvgUlm2(vesicle);
+    storeUlm2(vesicle);
+    saveAvgUlm2(vesicle);
 
 	write_vertex_xml_file(vesicle,i);
 	fprintf(stderr, "Loop %d completed.\n",i+1);
@@ -89,6 +90,7 @@
 		fprintf(fh,"%d,\t%d,\t%e\n", i, j-i, sph->sumUlm2[i][j]/(ts_double)sph->N);
 
     		}
+    fprintf(fh,"\n");
 	}
 	fclose(fh);
 	return TS_SUCCESS;

--
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