From 6c3bb91fea92c5013507bdf4f5ac49e889e213ff Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@fe.uni-lj.si>
Date: Tue, 06 Oct 2015 12:07:39 +0000
Subject: [PATCH] Unkonown merge difference between different directories are merged together.

---
 src/bondflip.c |   69 ++++++++++++++++++----------------
 1 files changed, 36 insertions(+), 33 deletions(-)

diff --git a/src/bondflip.c b/src/bondflip.c
index 31836e8..3a31a28 100644
--- a/src/bondflip.c
+++ b/src/bondflip.c
@@ -170,6 +170,10 @@
   //Neigbours of k, it, km, kp don't change its energy.
 
 	if(vesicle->pswitch == 1 || vesicle->tape->constvolswitch==1){dvol = -lm->volume - lp->volume;}
+      
+/*    vesicle_volume(vesicle);
+    fprintf(stderr,"Volume in the beginning=%1.16e\n", vesicle->volume);
+*/
 
 /* fix data structure for flipped bond */
     ts_flip_bond(k,it,km,kp, bond,lm, lp, lm2, lp1);
@@ -189,38 +193,33 @@
 		if(vesicle->pswitch==1) delta_energy-= vesicle->pressure*dvol;
 	}
 
-    retval=TS_SUCCESS;
     if(vesicle->tape->constvolswitch == 1){
         retval=constvolume(vesicle, it, -dvol, &delta_energy_cv, &constvol_vtx_moved,&constvol_vtx_backup);
         if(retval==TS_FAIL){
 /* restoration procedure copied from few lines below */
-		for(i=0;i<4;i++){
-//			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
-			free(orig_vtx[i]->neigh);
-			free(orig_vtx[i]->tristar);
-			free(orig_vtx[i]->bond);
-			free(orig_tria[i]->neigh);
-			memcpy((void *)orig_vtx[i],(void *)bck_vtx[i],sizeof(ts_vertex));
-			memcpy((void *)orig_tria[i],(void *)bck_tria[i],sizeof(ts_triangle));
-//			fprintf(stderr,"Restored vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
-			/* level 2 pointers are redirected*/
-		}
-		memcpy(bond,bck_bond,sizeof(ts_bond));
-
-		for(i=0;i<4;i++){
-			free(bck_vtx[i]);
-			free(bck_tria[i]);
-/*			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d =",i, orig_vtx[i]->neigh_no );
-			for(j=0;j<orig_vtx[i]->neigh_no;j++) fprintf(stderr," %d", orig_vtx[i]->neigh[j]->idx);
-			fprintf(stderr,"\n"); */
-		}
-
-		free(bck_bond);
-        return TS_FAIL;
-
+            for(i=0;i<4;i++){
+    //			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
+                free(orig_vtx[i]->neigh);
+                free(orig_vtx[i]->tristar);
+                free(orig_vtx[i]->bond);
+                free(orig_tria[i]->neigh);
+                memcpy((void *)orig_vtx[i],(void *)bck_vtx[i],sizeof(ts_vertex));
+                memcpy((void *)orig_tria[i],(void *)bck_tria[i],sizeof(ts_triangle));
+    //			fprintf(stderr,"Restored vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
+                /* level 2 pointers are redirected*/
+            }
+            memcpy(bond,bck_bond,sizeof(ts_bond));
+            for(i=0;i<4;i++){
+                free(bck_vtx[i]);
+                free(bck_tria[i]);
+    /*			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d =",i, orig_vtx[i]->neigh_no );
+                for(j=0;j<orig_vtx[i]->neigh_no;j++) fprintf(stderr," %d", orig_vtx[i]->neigh[j]->idx);
+                fprintf(stderr,"\n"); */
+            }
+            free(bck_bond);
+            return TS_FAIL;
         }
-    
-    delta_energy+=delta_energy_cv;
+        delta_energy+=delta_energy_cv;
     }
 
 
@@ -239,6 +238,9 @@
             //not accepted, reverting changes
 	    //restore all backups
 //		fprintf(stderr,"Restoring!!!\n");
+        if(vesicle->tape->constvolswitch == 1){
+            constvolumerestore(constvol_vtx_moved,constvol_vtx_backup);
+        }
 
 		for(i=0;i<4;i++){
 //			fprintf(stderr,"Restoring vtx neigh[%d] with neighbours %d\n",i, orig_vtx[i]->neigh_no );
@@ -263,10 +265,9 @@
 
 		free(bck_bond);
 
-        if(vesicle->tape->constvolswitch == 1){
-            constvolumerestore(constvol_vtx_moved,constvol_vtx_backup);
-        }
 //		fprintf(stderr,"Restoration complete!!!\n");
+//    vesicle_volume(vesicle);
+//    fprintf(stderr,"Volume after fail=%1.16e\n", vesicle->volume);
 
 		return TS_FAIL;
         }
@@ -274,6 +275,9 @@
      /* IF BONDFLIP ACCEPTED, THEN RETURN SUCCESS! */
 //            fprintf(stderr,"SUCCESS!!!\n");
 
+    if(vesicle->tape->constvolswitch == 1){
+        constvolumeaccept(vesicle,constvol_vtx_moved,constvol_vtx_backup);
+    }
 	// delete all backups
 	for(i=0;i<4;i++){
 	free(bck_vtx[i]->neigh);
@@ -288,10 +292,9 @@
 */	
 	}
 	free(bck_bond);
-    if(vesicle->tape->constvolswitch == 1){
-        constvolumeaccept(vesicle,constvol_vtx_moved,constvol_vtx_backup);
-    }
 
+//    vesicle_volume(vesicle);
+//    fprintf(stderr,"Volume after success=%1.16e\n", vesicle->volume);
     return TS_SUCCESS;
 }
 

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