From 6c274defd904dedd6cb89c002f5eeced6c079d47 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@gmail.com>
Date: Tue, 11 Dec 2018 11:42:22 +0000
Subject: [PATCH] Added stretching variables

---
 src/tape |   14 +++++++++++---
 1 files changed, 11 insertions(+), 3 deletions(-)

diff --git a/src/tape b/src/tape
index 48016a2..9d7363b 100644
--- a/src/tape
+++ b/src/tape
@@ -59,7 +59,7 @@
 mcsweeps=2000
 #how many initial mcsweeps*inititer MC sweeps before recording to disk?
 #2
-inititer=1
+inititer=0
 #how many records do you want on the disk iteration are there in a run?
 #10000
 iterations=100
@@ -86,12 +86,20 @@
 #cuda options???
 
 
-#NirGov branch only!
 #number of vertices with spontaneous curvature (integer)
 number_of_vertices_with_c0=100
-#spontaneous curvature (float)
+#c0/2 is spontaneous curvature. c0 is used as (c1+c1-c0)^2 in energy term (float)
 c0=0.5
 #energy of attraction of vertices with spontaneous curvature (float, positive value for attraction)
 w=10.0
 #direct force on vesicles with spontaneous curvature (float)
 F=2.0
+
+
+
+#plane confinement
+plane_confinement_switch=1
+#final plane distance (float in lmin)
+plane_d=10
+#plane to vesicle repulsion force while closing
+plane_F=10

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