From 624f819d40ca2204b0a128970dcd3d9ca7e17699 Mon Sep 17 00:00:00 2001
From: mihaf <miha.fosnaric@gmail.com>
Date: Fri, 14 Mar 2014 09:36:05 +0000
Subject: [PATCH] Added filaments inside the vesicle. TODO: tape etc.

---
 src/tape |   20 ++++++++++++++------
 1 files changed, 14 insertions(+), 6 deletions(-)

diff --git a/src/tape b/src/tape
index 59b417a..38871bd 100644
--- a/src/tape
+++ b/src/tape
@@ -4,23 +4,31 @@
 # dmax is the max. bond length (in units l_min)
 dmax=1.7
 # bending rigidity of the membrane (in units kT)
-xk0=25.0
+xk0=10.0
 # max step size (in units l_min)
 stepsize=0.15
 
 # Pressure calculations
 # (pswitch=1: calc. p*dV energy contribution)
 pswitch = 0
-# pressure difference: p_inside - p_outside (in units l_min^3/kT):
+# pressure difference: p_inside - p_outside (in units kT/l_min^3):
 pressure=0.0
 
-####### Polymer definitions ###########
+####### Polymer (brush) definitions ###########
 # npoly is a number of polymers attached to npoly distinct vertices on vesicle
-npoly=20
+npoly=0
 # nmono is a number of monomers in each polymer
 nmono=10
 # Spring constant between monomers of the polymer
 k_spring=800
+
+####### Filament (inside the vesicle) definitions ###########
+# npoly is a number of polymers attached to npoly distinct vertices on vesicle
+nfil=0
+# nmono is a number of monomers in each filament
+nfono=10
+# Spring constant between monomers of the filament
+k_sfring=800
 
 #######  Cell definitions ############
 nxmax=60
@@ -30,11 +38,11 @@
 
 ####### Program Control ############
 #how many MC sweeps between subsequent records of states to disk
-mcsweeps=500
+mcsweeps=5000
 #how many initial mcsweeps*inititer MC sweeps before recording to disk?
 inititer=1
 #how many records do you want on the disk iteration are there in a run?
-iterations=10
+iterations=1000
 
 
 #shut up if we are using cluster!!!

--
Gitblit v1.9.3