From 61ad95ca712a374f6e58127fda738b67c57d743d Mon Sep 17 00:00:00 2001 From: Samo Penic <samo.penic@gmail.com> Date: Wed, 04 Jan 2017 21:19:52 +0000 Subject: [PATCH] Added many changes to trisurf.py. Mostly readability. Great fix in class Runner by introducing @property tag --- src/tape | 19 +++++++++++++++---- 1 files changed, 15 insertions(+), 4 deletions(-) diff --git a/src/tape b/src/tape index a7baa73..f2edf02 100644 --- a/src/tape +++ b/src/tape @@ -25,9 +25,9 @@ ####### Polymer (brush) definitions ########### # npoly is a number of polymers attached to npoly distinct vertices on vesicle -npoly=800 +npoly=400 # nmono is a number of monomers in each polymer -nmono=6 +nmono=10 # Spring constant between monomers of the polymer k_spring=800 #set to 1 if half of the polymeres are inside the vesicle @@ -56,10 +56,10 @@ ####### Program Control ############ #how many MC sweeps between subsequent records of states to disk #200000 -mcsweeps=200 +mcsweeps=2000 #how many initial mcsweeps*inititer MC sweeps before recording to disk? #2 -inititer=10 +inititer=1 #how many records do you want on the disk iteration are there in a run? #10000 iterations=100 @@ -84,3 +84,14 @@ #max number of processes in distributed (voluntary) environment distributed_processes=50 #cuda options??? + + +#NirGov branch only! +#number of vertices with spontaneous curvature (integer) +number_of_vertices_with_c0=100 +#spontaneous curvature (float) +c0=0.5 +#energy of attraction of vertices with spontaneous curvature (float, positive value for attraction) +w=10.0 +#direct force on vesicles with spontaneous curvature (float) +F=2.0 -- Gitblit v1.9.3