From 459ff94855b2659de14ac2ac902b9658d28e19d5 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo@CAE-linux.(none)>
Date: Mon, 21 Apr 2014 11:11:37 +0000
Subject: [PATCH] Added complex spherical harmonics.

---
 src/io.h |   51 +++++++++++++++++++++++++++++++++++++++++++++++----
 1 files changed, 47 insertions(+), 4 deletions(-)

diff --git a/src/io.h b/src/io.h
index f76eb09..699c73e 100644
--- a/src/io.h
+++ b/src/io.h
@@ -6,8 +6,48 @@
 static char prefixname[1024];
 static ts_bool restore=0;
 static char tape[1024]; */
-char path[1024];
 int force_from_tape;
+
+
+typedef struct {
+	long int nshell;
+	long int ncxmax;
+	long int ncymax;
+	long int nczmax;
+	long int npoly;
+	long int nmono;
+	long int nfil;
+	long int nfono;
+	long int R_nucleus;
+	long int pswitch;
+    	char *multiprocessing;
+   	long int brezveze0;
+    	long int brezveze1;
+    	long int brezveze2;
+    	ts_double xk0;
+	ts_double dmax;
+	ts_double dmin_interspecies;
+	ts_double stepsize;
+	ts_double kspring;
+	ts_double xi;
+	ts_double pressure;
+	long int iterations;
+	long int inititer;
+	long int mcsweeps;
+	long int quiet;
+	long int shc;
+} ts_tape;
+
+typedef struct{
+	ts_int force_from_tape;
+	ts_int reset_iteration_count;
+    char path[1024]; //path where all files should be added
+    char output_fullfilename[1024]; //name of the master file
+    char dump_fullfilename[1024]; //name of the dump file
+    char tape_fullfilename[1024]; //name of the tape file
+} ts_args;
+
+ts_args command_line_args;
 
 ts_bool parse_args(int argc, char **argv);
 
@@ -60,8 +100,11 @@
 ts_bool write_vertex_vtk_file(ts_vesicle *vesicle,ts_char *filename, ts_char *text);
 ts_bool write_vertex_xml_file(ts_vesicle *vesicle, ts_uint timestepno);
 ts_bool write_master_xml_file(ts_char *filename);
-ts_vesicle *parsetape(ts_uint *mcsweeps, ts_uint *inititer, ts_uint *iterations);
+ts_bool write_pov_file(ts_vesicle *vesicle, char *filename);
 
-ts_bool dump_state(ts_vesicle *vesicle);
-ts_vesicle *restore_state();
+ts_tape *parsetape(char *filename);
+ts_bool tape_free(ts_tape *tape);
+
+ts_bool dump_state(ts_vesicle *vesicle, ts_uint iteration);
+ts_vesicle *restore_state(ts_uint *iteration);
 #endif

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