From 402e8f59c31856000c303e2527f80917422760df Mon Sep 17 00:00:00 2001 From: mihaf <miha.fosnaric@gmail.com> Date: Fri, 21 Mar 2014 10:07:26 +0000 Subject: [PATCH] Little add. --- src/tape | 26 +++++++++++++++++++------- 1 files changed, 19 insertions(+), 7 deletions(-) diff --git a/src/tape b/src/tape index 2d9f978..3f2386a 100644 --- a/src/tape +++ b/src/tape @@ -4,23 +4,35 @@ # dmax is the max. bond length (in units l_min) dmax=1.7 # bending rigidity of the membrane (in units kT) -xk0=1.0 +xk0=10.0 # max step size (in units l_min) stepsize=0.15 # Pressure calculations # (pswitch=1: calc. p*dV energy contribution) pswitch = 0 -# pressure difference: p_inside - p_outside (in units l_min^3/kT): -pressure=0.0 +# pressure difference: p_inside - p_outside (in units kT/l_min^3): +pressure = -10.0 -####### Polymer definitions ########### +####### Polymer (brush) definitions ########### # npoly is a number of polymers attached to npoly distinct vertices on vesicle npoly=0 # nmono is a number of monomers in each polymer nmono=10 # Spring constant between monomers of the polymer k_spring=800 + +####### Filament (inside the vesicle) definitions ########### +# nfil is a number of filaments inside the vesicle +nfil=1 +# nfono is a number of monomers in each filament +nfono=300 +# Persistence lenght of the filaments (in units l_min) +xi=100 + +####### Nucleus (inside the vesicle) ########### +# Radius of an impenetrable hard sphere inside the vesicle +R_nucleus=5 ####### Cell definitions ############ nxmax=60 @@ -30,11 +42,11 @@ ####### Program Control ############ #how many MC sweeps between subsequent records of states to disk -mcsweeps=50 +mcsweeps=10000 #how many initial mcsweeps*inititer MC sweeps before recording to disk? -inititer=1 +inititer=0 #how many records do you want on the disk iteration are there in a run? -iterations=10 +iterations=5000 #shut up if we are using cluster!!! -- Gitblit v1.9.3