From 3f5c83bc26e98dd41e93fc9023a610cd0ec1d363 Mon Sep 17 00:00:00 2001
From: Samo Penic <samo.penic@fe.uni-lj.si>
Date: Tue, 11 Mar 2014 08:52:58 +0000
Subject: [PATCH] Fixed bugs when dump file is missing. Prepared flags for setting filenames
---
src/poly.c | 8 +++++---
1 files changed, 5 insertions(+), 3 deletions(-)
diff --git a/src/poly.c b/src/poly.c
index edab18f..2057db1 100644
--- a/src/poly.c
+++ b/src/poly.c
@@ -4,6 +4,7 @@
#include"vertex.h"
#include"bond.h"
#include<math.h>
+#include"energy.h"
ts_bool poly_assign_spring_const(ts_vesicle *vesicle){
ts_uint i;
@@ -30,6 +31,7 @@
for(i=0;i<poly->blist->n;i++){
poly->blist->bond[i]->bond_length=sqrt(vtx_distance_sq(poly->blist->bond[i]->vtx1,poly->blist->bond[i]->vtx2));
+ bond_energy(poly->blist->bond[i],poly);
}
return poly;
@@ -39,7 +41,7 @@
ts_poly_list *init_poly_list(ts_uint n_poly, ts_uint n_mono, ts_vertex_list *vlist){
ts_poly_list *poly_list=(ts_poly_list *)calloc(1,sizeof(ts_poly_list));
poly_list->poly = (ts_poly **)calloc(n_poly,sizeof(ts_poly *));
- ts_uint i=0,j=0, idx;
+ ts_uint i=0,j=0; //idx;
ts_uint gvtxi;
ts_double xnorm,ynorm,znorm,normlength;
@@ -79,7 +81,7 @@
}
//index correction for polymeres. Important, since each vtx has to have unique id
- idx=vlist->n;
+/* idx=vlist->n;
for(i=0;i<n_poly;i++){
for(j=0;j<n_mono;j++,idx++){
@@ -87,7 +89,7 @@
}
}
-
+*/
return poly_list;
}
--
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