From 3a018d380395889059bf582015fb2935a9a20fb0 Mon Sep 17 00:00:00 2001
From: mihaf <miha.fosnaric@gmail.com>
Date: Thu, 27 Feb 2014 14:55:13 +0000
Subject: [PATCH] Bug found and removed: polys now also translated when origin moves to the center of mass. All seems OK after firt testing. :)

---
 src/main.c |   28 ++++++++++------------------
 1 files changed, 10 insertions(+), 18 deletions(-)

diff --git a/src/main.c b/src/main.c
index c651382..53f4b0e 100644
--- a/src/main.c
+++ b/src/main.c
@@ -10,6 +10,7 @@
 #include "initial_distribution.h"
 #include "frame.h"
 #include "timestep.h"
+#include "poly.h"
 
 /** Entrance function to the program
   * @param argv is a number of parameters used in program call (including the program name
@@ -18,7 +19,7 @@
 */
 
 int main(int argv, char *argc[]){
-ts_uint i,n;
+ts_uint inititer,mcsweeps, iterations;
 ts_vesicle *vesicle;
 /* THIS SHOULD GO INTO UNIT TEST
 ts_bool retval;
@@ -63,25 +64,16 @@
 vtx_list_free(vlist1);
 printf("Tests complete.\n");
 */
-vesicle=parsetape(&n);
+vesicle=parsetape(&mcsweeps, &inititer, &iterations);
 
-//these four must come from parsetype!
-/*
-vesicle->dmax=1.67*1.67;
-vesicle->stepsize=0.15;
-vesicle->clist->max_occupancy=8;
-vesicle->bending_rigidity=25.0;
-*/
-// fprintf(stderr,"xk=%f\n",vesicle->bending_rigidity);
+/*Testing */
+//vesicle->poly_list=init_poly_list(1400,20,vesicle->vlist);
 
-centermass(vesicle);
-cell_occupation(vesicle);
-for(i=0;i<n;i++){
-single_timestep(vesicle);
-if(i%100==0){
-write_vertex_xml_file(vesicle,i/100);
-}
-}
+//poly_list_free(vesicle->poly_list);
+/*End testing*/
+
+run_simulation(vesicle, mcsweeps, inititer, iterations);
+
 write_master_xml_file("test.pvd");
 write_dout_fcompat_file(vesicle,"dout");
 vesicle_free(vesicle);

--
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