From 37d14a0a50ed40f536cc3821b3584552e1b75c5c Mon Sep 17 00:00:00 2001
From: Samo Penic <samo@CAE-linux.(none)>
Date: Mon, 07 Apr 2014 19:55:16 +0000
Subject: [PATCH] added statistics output to the outer loop

---
 src/tape |   28 +++++++++++++++++-----------
 1 files changed, 17 insertions(+), 11 deletions(-)

diff --git a/src/tape b/src/tape
index 38871bd..dbaabdb 100644
--- a/src/tape
+++ b/src/tape
@@ -3,6 +3,8 @@
 nshell=17
 # dmax is the max. bond length (in units l_min)
 dmax=1.7
+# dmin_interspecies in the min. dist. between different vertex species (in units l_min)
+dmin_interspecies=1.2
 # bending rigidity of the membrane (in units kT)
 xk0=10.0
 # max step size (in units l_min)
@@ -10,9 +12,9 @@
 
 # Pressure calculations
 # (pswitch=1: calc. p*dV energy contribution)
-pswitch = 0
+pswitch = 1
 # pressure difference: p_inside - p_outside (in units kT/l_min^3):
-pressure=0.0
+pressure=-1.0
 
 ####### Polymer (brush) definitions ###########
 # npoly is a number of polymers attached to npoly distinct vertices on vesicle
@@ -23,12 +25,16 @@
 k_spring=800
 
 ####### Filament (inside the vesicle) definitions ###########
-# npoly is a number of polymers attached to npoly distinct vertices on vesicle
-nfil=0
-# nmono is a number of monomers in each filament
-nfono=10
-# Spring constant between monomers of the filament
-k_sfring=800
+# nfil is a number of filaments inside the vesicle
+nfil=2
+# nfono is a number of monomers in each filament
+nfono=300
+# Persistence lenght of the filaments (in units l_min)
+xi=5000
+
+####### Nucleus (inside the vesicle) ###########
+# Radius of an impenetrable hard sphere inside the vesicle
+R_nucleus=5
 
 #######  Cell definitions ############
 nxmax=60
@@ -38,11 +44,11 @@
 
 ####### Program Control ############
 #how many MC sweeps between subsequent records of states to disk
-mcsweeps=5000
+mcsweeps=10
 #how many initial mcsweeps*inititer MC sweeps before recording to disk?
-inititer=1
+inititer=0
 #how many records do you want on the disk iteration are there in a run?
-iterations=1000
+iterations=20
 
 
 #shut up if we are using cluster!!!

--
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