From 37d14a0a50ed40f536cc3821b3584552e1b75c5c Mon Sep 17 00:00:00 2001
From: Samo Penic <samo@CAE-linux.(none)>
Date: Mon, 07 Apr 2014 19:55:16 +0000
Subject: [PATCH] added statistics output to the outer loop

---
 src/io.h |   12 +++++++++++-
 1 files changed, 11 insertions(+), 1 deletions(-)

diff --git a/src/io.h b/src/io.h
index c8dfd17..117c9ff 100644
--- a/src/io.h
+++ b/src/io.h
@@ -6,7 +6,6 @@
 static char prefixname[1024];
 static ts_bool restore=0;
 static char tape[1024]; */
-char path[1024];
 int force_from_tape;
 
 
@@ -17,6 +16,9 @@
 	long int nczmax;
 	long int npoly;
 	long int nmono;
+	long int nfil;
+	long int nfono;
+	long int R_nucleus;
 	long int pswitch;
     	char *multiprocessing;
    	long int brezveze0;
@@ -24,8 +26,10 @@
     	long int brezveze2;
     	ts_double xk0;
 	ts_double dmax;
+	ts_double dmin_interspecies;
 	ts_double stepsize;
 	ts_double kspring;
+	ts_double xi;
 	ts_double pressure;
 	long int iterations;
 	long int inititer;
@@ -36,6 +40,10 @@
 typedef struct{
 	ts_int force_from_tape;
 	ts_int reset_iteration_count;
+    char path[1024]; //path where all files should be added
+    char output_fullfilename[1024]; //name of the master file
+    char dump_fullfilename[1024]; //name of the dump file
+    char tape_fullfilename[1024]; //name of the tape file
 } ts_args;
 
 ts_args command_line_args;
@@ -91,6 +99,8 @@
 ts_bool write_vertex_vtk_file(ts_vesicle *vesicle,ts_char *filename, ts_char *text);
 ts_bool write_vertex_xml_file(ts_vesicle *vesicle, ts_uint timestepno);
 ts_bool write_master_xml_file(ts_char *filename);
+ts_bool write_pov_file(ts_vesicle *vesicle, char *filename);
+
 ts_tape *parsetape(char *filename);
 ts_bool tape_free(ts_tape *tape);
 

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